Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01635 ATGCCAGTTCCACTTGCTCCTTATCCAACACCACCGGCTCCACATACTCCTCCATCCGCAAATGGTCAACAGAGTCAACTTGTGTGTTCTGGCTGTAGAAACCTTTTGCTCTATCCGGTTGGAGCCTCCTCTGTTTGCTGTGCTGTTTGCAATGCAGTCACCGCCGTGCCGCCTCCCGGAACGGAAATGGCCCAGTTAATCTGTGGAGGCTGCCATACATTACTAATGTACATCCGTGGCGCAACAAGTGTCCAATGCTCATGCTGTCACACTGTGAATCTAGCCATGGAAGCAAATCAGGTGGCACATGTCAATTGTGGCAGCTGCAGGATGCTACTGATGTACCAATATGGAGCAACATCTGTTAAATGTGCAGTTTGCAATTTTGTAACTTCAATTGGGGCATCAACAAGCATCACAGAGCAGAAGTTCAGCAACTAA 441 0.4853 MPVPLAPYPTPPAPHTPPSANGQQSQLVCSGCRNLLLYPVGASSVCCAVCNAVTAVPPPGTEMAQLICGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGSCRMLLMYQYGATSVKCAVCNFVTSIGASTSITEQKFSN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01635 146 Pfam LSD1 zinc finger 29 53 IPR005735 -
Arst1g01635 146 Pfam LSD1 zinc finger 106 130 IPR005735 -
Arst1g01635 146 Pfam LSD1 zinc finger 68 92 IPR005735 -
Arst1g01635 146 NCBIfam zinc finger domain, LSD1 subclass 65 94 IPR005735 -
Arst1g01635 146 NCBIfam zinc finger domain, LSD1 subclass 103 132 IPR005735 -
Arst1g01635 146 NCBIfam zinc finger domain, LSD1 subclass 26 56 IPR005735 -
Arst1g01635 146 SUPERFAMILY Multiheme cytochromes 29 127 IPR036280 -
Arst1g01635 146 PANTHER PROTEIN LSD1 15 56 IPR040319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01635 Arst-Chr1 27165604 27167883 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Arst1g01635 zf-LSD1 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01635 - - rcu:8284618 248.054