Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01634 ATGCCAGTTCCACTTGCTCCTTATCCAACACCACCGGCTCCACATACTCCTCCATCCGCAAATGCAGGTCAACAGAGTCAACTTGTGTGTTCTGGCTGTAGAAACCTTTTGCTCTATCCGGTTGGAGCCTCCTCTGTTTGCTGTGCTGTTTGCAATGCAGTCACCGCCGTGCCGCCTCCCGGAACGGAAATGGCCCAGTTAATCTGTGGAGGCTGCCATACATTACTAATGTACATCCGTGGCGCAACAAGTGTCCAATGCTCATGCTGTCACACTGTGAATCTAGCCATGGAAGGCATCAACAAGCATCACAGAGCAGAAGTTCAGCAACTAAATCAAACTATATATAGAGCAAAGTTAAATGATACAGAGACTCTACTATCTTGGTTTTGCTAG 396 0.4773 MPVPLAPYPTPPAPHTPPSANAGQQSQLVCSGCRNLLLYPVGASSVCCAVCNAVTAVPPPGTEMAQLICGGCHTLLMYIRGATSVQCSCCHTVNLAMEGINKHHRAEVQQLNQTIYRAKLNDTETLLSWFC 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01634 131 MobiDBLite consensus disorder prediction 1 21 - -
Arst1g01634 131 MobiDBLite consensus disorder prediction 1 18 - -
Arst1g01634 131 PANTHER PROTEIN LSD1 25 109 IPR040319 -
Arst1g01634 131 Pfam LSD1 zinc finger 69 93 IPR005735 -
Arst1g01634 131 Pfam LSD1 zinc finger 30 54 IPR005735 -
Arst1g01634 131 NCBIfam zinc finger domain, LSD1 subclass 66 95 IPR005735 -
Arst1g01634 131 NCBIfam zinc finger domain, LSD1 subclass 27 57 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01634 Arst-Chr1 27165604 27167914 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Arst1g01634 zf-LSD1 8.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01634 - - mnt:21406053 159.458