Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01614 ATGAAATGTTGTGAAGCTAGAGCTTTACTAGGAAGCCTTGAATATCAGAAGGGTAATTTTGAAGCAGCACTTCATGTATTTGAAGGAATAGACATTGCAGCTGTTGCTCCAAAGATGAAAATTTCTATATCTAGAAGATGTGAACGGAATATGAATAGACGCCGTTCGTTGAGTGATGCAGCACCTCCTATGTCCATTCATGCTGTTAGTCTACTTCTTGAAGCTGTTTTGCTCAAGGCAAAGTCATTCCAGATTCTTGGAAGGTTTCAAGAAGCTGCTAGATCATGCAAGACTATTTTGGACACCGTTGAATCTGCATTACCTGAAGGATGGCCTGAGAACTTTGATTTAGACAGAAAGTTACAAGAGACTATAAGAAATGCTGTAGAACTACTTCCAGAGCTATGGAACCTTGCCGGCTCTCATCAACATGTCATATCATCATTTAGGAGGGCCTTGCTTTATCCATGGAATCTTGACATTGAAACAACTTCAAGAATTCAAAAGGAATTTGCTATGTTTCTTCTGTATAGCGGCTGTGAAGCGAGTCCTCCTTCGCTTCGCTCTCAATTGGACGGTTCCTTTGTCCCAAGAAACAATATAGAAGAAGCTGTTCTCTTGCTTCTTATTCTGCTGAGAAATTCTGCTATAGGAAGCATTGAATGGGACCCTTCAGTAGTTGATCATCTTTCTTTTGCTCTAACTGTTTCCGGGGAGTTCAAGACACTGGCTCAACAGGTTGAGGAATTGCTTCCGGAAACCATGGAGAGGAAAGAAAGACATTATATTCTAGCACTTTGTTACTTTGGTGAAGGTGAGCACATGATTGCTTTGGATCTTTTGAGGAACTCTTTGAATGATAGAGAGAACTCGGAGTGCGAACAGGAACTGCTTCTAGCTTCAAAAATTTGTGCAGATAACATGGTTTGTGTTGAGGATGGAATCAAATATTCTTGCAAAGCAATTTCTCAGTTGGATGGAAAGTGCATGCAAGTGGTGGCAATTGCATATTGCTTACTAGGTGTTCTGCTCTCATCGAAATCAAGGTTGATAGCTTCTGATTCAGAGAAAGTTTTAATGCAATCCGAAGCACTGAGGGCTCTGAAAACGGCAGAGAGAACGATGAGTGAGAGTGATCCTTACATAGTCCTTCATCTTTGTCTAGAATACGCCGAGCAGCGGAACTTGAGCATTGCTTTTTGTCATGCAAAGGAACTGGTTAAGCTTGAGGGTGGATCTAGTGTTGCTGCATATGTATTACTTGCAAGGATTTTATCAGCTCAAAAGAATTTTGTGGATGCAGAGTTGGTTATTGATGCTGCCATAGATCAAAGTGGGAAATGGGATCAAGGAGAGTTGTTGAGAACCAAAGCGAAACTCCGGATTGCACAGGGAAGATTAAGGAGTGCAGTGGAGACATATACTTTCCTCCTTGCTGTGCTTCAAGTCCAAAACAAAAGTTTGGGCACTGCAAATAAGGTTATGAAGTTTCACTCTAGCATTTGA 1506 0.4124 MKCCEARALLGSLEYQKGNFEAALHVFEGIDIAAVAPKMKISISRRCERNMNRRRSLSDAAPPMSIHAVSLLLEAVLLKAKSFQILGRFQEAARSCKTILDTVESALPEGWPENFDLDRKLQETIRNAVELLPELWNLAGSHQHVISSFRRALLYPWNLDIETTSRIQKEFAMFLLYSGCEASPPSLRSQLDGSFVPRNNIEEAVLLLLILLRNSAIGSIEWDPSVVDHLSFALTVSGEFKTLAQQVEELLPETMERKERHYILALCYFGEGEHMIALDLLRNSLNDRENSECEQELLLASKICADNMVCVEDGIKYSCKAISQLDGKCMQVVAIAYCLLGVLLSSKSRLIASDSEKVLMQSEALRALKTAERTMSESDPYIVLHLCLEYAEQRNLSIAFCHAKELVKLEGGSSVAAYVLLARILSAQKNFVDAELVIDAAIDQSGKWDQGELLRTKAKLRIAQGRLRSAVETYTFLLAVLQVQNKSLGTANKVMKFHSSI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01614 501 SUPERFAMILY TPR-like 260 479 IPR011990 GO:0005515
Arst1g01614 501 Gene3D Tetratricopeptide repeat domain 2 492 IPR011990 GO:0005515
Arst1g01614 501 PANTHER PROTEIN NPG1 5 495 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01614 Arst-Chr1 25569731 25571949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01614 5 499 Calmodulin-binding Proteins AT4G28600 53.707 3.65e-166 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01614 K21843 - adu:127747727 953.74