Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01609 ATGGAATCGTCATCACCTAGCTGGTTACATGATCTGCAGGAAATGGAAGATGATTACAACAATTTCTTTCCGAAAGAGTACAGGATGAACAACTCGATTGATGATTATGATGAAGATTTATTTTTCGCACATGACATGGGGAATTCAATAATGTTCGAGTCACCAAGCAATAATAATAATTACTCTTCCGTTGATGAAACTAGTTTTGATGATGAGAGGCCTTCTAAGTTTCTCAAAACAAGTACCAATACTGATAATAATTCTTATTATTCATCATTATCACCAAATTTTTCTTCCCTCTCATCATCATCAATAACATCATTTCAGCCACAAATTCTGTGCTTTGACAACTCAAACTCCTCTCTCAATAATAATGATAATACCACCCAGCTTTATGATTTAGATTATACAACCTTGAACACAGAGACAAAACTAAAAGAGGTGGTAAATGGGTCATCAAAAAATCAAAACCTGGTCACAAAATCCTCATCAAAGGGTTCTAAGAGATCACCATCTAACGCTCAGGATCATATCATAGCTGAGAGGAAGAGAAGAGAGAAGATCAGCCAGAGTTTCATTGCTCTTGCAGCTCTTGTTCCTGGCCTCAAGAAGATAGACAAAGTTACTGTGTTAGAGAATGCAATCAAGTACGTGAAGGATCTCAAAATTCGTCTTACAACACTAGAACAAGAAAATAATGAAAAAATAAAGGAAATAGTAGAAGAGCCTTCTGTGATTGTTCTTAACAAAAGGTTACCACATGATAATGAGAGTGACGATGAGAGCGTTATTGTTGATAATACTTCTAATCATGATTCTTCTTCACTTCTCCATCATGTGGAAGCAAGAGTATCAGGGCAACATGTTTTGATTCGGATTCAGTGTCAAAAGCATAAGGGTATTTTAGTCAAATTACTTTCTGAGATTCAAGGACATAACCTGCTTGTTTTAAATAGTAGTGCGTTGCCTTTTGGAGATTCGGTTCTTGATATAACTATCATTACTCGGATGGGCGAAGGGTACAATTTGACCGTTAAGGAACTTGTCAAGAGCATACGCGTGGAAACATTGAAGTTCATCTTGTCATAA 1089 0.3627 MESSSPSWLHDLQEMEDDYNNFFPKEYRMNNSIDDYDEDLFFAHDMGNSIMFESPSNNNNYSSVDETSFDDERPSKFLKTSTNTDNNSYYSSLSPNFSSLSSSSITSFQPQILCFDNSNSSLNNNDNTTQLYDLDYTTLNTETKLKEVVNGSSKNQNLVTKSSSKGSKRSPSNAQDHIIAERKRREKISQSFIALAALVPGLKKIDKVTVLENAIKYVKDLKIRLTTLEQENNEKIKEIVEEPSVIVLNKRLPHDNESDDESVIVDNTSNHDSSSLLHHVEARVSGQHVLIRIQCQKHKGILVKLLSEIQGHNLLVLNSSALPFGDSVLDITIITRMGEGYNLTVKELVKSIRVETLKFILS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01609 362 MobiDBLite consensus disorder prediction 53 84 - -
Arst1g01609 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 241 IPR036638 GO:0046983
Arst1g01609 362 Pfam Helix-loop-helix DNA-binding domain 176 221 IPR011598 GO:0046983
Arst1g01609 362 Coils Coil 211 238 - -
Arst1g01609 362 MobiDBLite consensus disorder prediction 148 174 - -
Arst1g01609 362 PANTHER BHLH TRANSCRIPTION FACTOR 41 356 - -
Arst1g01609 362 Gene3D - 163 238 IPR036638 GO:0046983
Arst1g01609 362 MobiDBLite consensus disorder prediction 148 176 - -
Arst1g01609 362 SMART finulus 178 227 IPR011598 GO:0046983
Arst1g01609 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01609 Arst-Chr1 24829820 24838293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01609 5 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 33.242 1.05e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst1g01609 HLH 6.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01609 - - ahf:112720570 569.311