Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01608 ATGGAATCGTCATCACCTAGCTGGTTACATGATCTGGAAATGGAAGATGATTACAACAATTTCTTTCCGAAAGAGTACAGGATGAACAACTCGATTGATGATTATGATGAAGATTTATTTTTCGCACATGACATGGGGAATTCAATAATGTTCGAGTCACCAAGCAATAATAATAATTACTCTTCCGTTGATGAAACTAGTTTTGATGATGAGAGGCCTTCTAAGTTTCTCAAAACAAGTACCAATACTGATAATAATTCTTATTATTCATCATTATCACCAAATTTTTCTTCCCTCTCATCATCATCAATAACATCATTTCAGCCACAAATTCTGTGCTTTGACAACTCAAACTCCTCTCTCAATAATAATGATAATACCACCCAGCTTTATGATTTAGATTATACAACCTTGAACACAGAGACAAAACTAAAAGAGGTGGTAAATGGGTCATCAAAAAATCAAAACCTGGTCACAAAATCCTCATCAAAGGGTTCTAAGAGATCACCATCTAACGCTCAGGATCATATCATAGCTGAGAGGAAGAGAAGAGAGAAGATCAGCCAGAGTTTCATTGCTCTTGCAGCTCTTGTTCCTGGCCTCAAGAAGATAGACAAAGTTACTGTGTTAGAGAATGCAATCAAGTACGTGAAGGATCTCAAAATTCGTCTTACAACACTAGAACAAGAAAATAATGAAAAAATAAAGGAAATAGTAGAAGAGCCTTCTGTGATTGTTCTTAACAAAAGGTTACCACATGATAATGAGAGTGACGATGAGAGCGTTATTGTTGATAATACTTCTAATCATGATTCTTCTTCACTTCTCCATCATGTGGAAGCAAGAGTATCAGGGCAACATGTTTTGATTCGGATTCAGTGTCAAAAGCATAAGGGTATTTTAGTCAAATTACTTTCTGAGATTCAAGGACATAACCTGCTTGTTTTAAATAGTAGTGCGTTGCCTTTTGGAGATTCGGTTCTTGATATAACTATCATTACTCGGATGGGCGAAGGGTACAATTTGACCGTTAAGGAACTTGTCAAGAGCATACGCGTGGAAACATTGAAGTTCATCTTGTCATAA 1086 0.3619 MESSSPSWLHDLEMEDDYNNFFPKEYRMNNSIDDYDEDLFFAHDMGNSIMFESPSNNNNYSSVDETSFDDERPSKFLKTSTNTDNNSYYSSLSPNFSSLSSSSITSFQPQILCFDNSNSSLNNNDNTTQLYDLDYTTLNTETKLKEVVNGSSKNQNLVTKSSSKGSKRSPSNAQDHIIAERKRREKISQSFIALAALVPGLKKIDKVTVLENAIKYVKDLKIRLTTLEQENNEKIKEIVEEPSVIVLNKRLPHDNESDDESVIVDNTSNHDSSSLLHHVEARVSGQHVLIRIQCQKHKGILVKLLSEIQGHNLLVLNSSALPFGDSVLDITIITRMGEGYNLTVKELVKSIRVETLKFILS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01608 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 175 240 IPR036638 GO:0046983
Arst1g01608 361 PANTHER BHLH TRANSCRIPTION FACTOR 40 355 - -
Arst1g01608 361 MobiDBLite consensus disorder prediction 148 173 - -
Arst1g01608 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Arst1g01608 361 MobiDBLite consensus disorder prediction 52 83 - -
Arst1g01608 361 MobiDBLite consensus disorder prediction 148 175 - -
Arst1g01608 361 Coils Coil 210 237 - -
Arst1g01608 361 Pfam Helix-loop-helix DNA-binding domain 175 220 IPR011598 GO:0046983
Arst1g01608 361 SMART finulus 177 226 IPR011598 GO:0046983
Arst1g01608 361 Gene3D - 162 237 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01608 Arst-Chr1 24829820 24838333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01608 5 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 33.058 2.70e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst1g01608 HLH 6.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01608 - - ahf:112720570 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01608 1 24829820 24838333 Arst1g01608 1 24829820 24838333 ECH