Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01604 ATGTACCAATTGGACTATGATGAAGGTCAATGGAATGAAATTTTACACACTAGAACATGCTTGAGAAAGAGCAACGCACAACAAGGGGATTTTCTAAAGGGCTATGCAGGCCAAGACATTTTTGCTTCACCCTTAGGAAAGGTTGACATAAACGACCTTCCGATACATCAACTTCAAAATTTGAAGATGATCAGGATGATGAGGATGGTGACATGGGTAGGGGATGATGTGATGGCGGACAAGTCTCTCTCTAGCCCCCTGCCACCACTGCAAAGGCCGCTGCCCCTGCTCGAAACGCTCCCTTCTTTGTTCTCTGTTCCCACCGCTGCTGCCCTCGCCACTGTAAAATCCGCCGCCGCTGTAAAAGCTGCCGCCGCCGCTACTCGAATCACAAATTTCTATTCCAGATATGACGATAGGCAGCAGAATCTGTTCTCTGACAGGTTTGCACTAAACCCCAATGCTTGCACACAGGAGATATCCGAGTTAAAATTCATATGGGATGCGGAGTATAACCTCATGATCCGGAAGATCTACGACCATTGGACAGCCAAATGTTTTCAGCAGATGACGAGTGATGACCAATCTTTATCTGTGGAATGCAAATCCAAAGAGCTAAGCAATTCTTGCACCGATGAAATTACCAGTTTTGAAGAGATGCTAGGAAGCATCAACGATGAAACCTTTTCACCGAAACTTTCTTCATCATCTTCAATTTTATCCTTAAGGTCTCAGATTCTGTCCTTTGATAACTCAGACTCGTTATCATCGTCTCCATCCAATAATACGACAGAATTTTATGAGTTGAAAAACACCTTAAACCAAAGACAAGACTCAGTTGAAACTCCAAATAATAATAATAAAAAGAGTGATTCCTTGAATACACAAAATGTGGAAGCAAAGAGTACCTCAACACTTGGTAAGAGGTCACCATCTCATGCTCACGATCATATCATAGCTGAGAGAAAGAGAAGAGAGAAGATCAGTCAGAGTTTCATTGCTCTTGCAGCCCTTGTTCCTGGCCTCAAGAAGATGGACAAGGCTTCTGTGTTGGGGGACTCTATCAGGTATGTGAAAGAGCTGAAAGAGCGTTTGGCAGTGCTCGAAGAAGAATCCAAGAAAACAAAGGCGAAAAAAGCAGAACAACTCCATGGTCATGGTGCTGCTGTGTTCTCCTCGTTATGCGAAGAGACCATTGATGGTAGTCTTCCACAGGTTGAAGCAAGAGAGTGGGGGCAACAAGTGTTGCTTCGAATCCACTGCTGGAAGGAAGAGGGCATTTTGGTCAGAATATTGTCTGAGATTCAAAGCCTTCAATTGATGCTTCTTAATAGCAGTGTCTTATCATTTGGAGATTCCATTCTTGACATAACCATCATTGTTCAGGCGGGCGAAGGTTACAACTTGACCCTTAATGAACTTGTCAAGAACCTACGCACCGCTACTTTGAAACTCATGTCATAG 1464 0.4372 MYQLDYDEGQWNEILHTRTCLRKSNAQQGDFLKGYAGQDIFASPLGKVDINDLPIHQLQNLKMIRMMRMVTWVGDDVMADKSLSSPLPPLQRPLPLLETLPSLFSVPTAAALATVKSAAAVKAAAAATRITNFYSRYDDRQQNLFSDRFALNPNACTQEISELKFIWDAEYNLMIRKIYDHWTAKCFQQMTSDDQSLSVECKSKELSNSCTDEITSFEEMLGSINDETFSPKLSSSSSILSLRSQILSFDNSDSLSSSPSNNTTEFYELKNTLNQRQDSVETPNNNNKKSDSLNTQNVEAKSTSTLGKRSPSHAHDHIIAERKRREKISQSFIALAALVPGLKKMDKASVLGDSIRYVKELKERLAVLEEESKKTKAKKAEQLHGHGAAVFSSLCEETIDGSLPQVEAREWGQQVLLRIHCWKEEGILVRILSEIQSLQLMLLNSSVLSFGDSILDITIIVQAGEGYNLTLNELVKNLRTATLKLMS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01604 487 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 312 361 IPR011598 GO:0046983
Arst1g01604 487 MobiDBLite consensus disorder prediction 274 316 - -
Arst1g01604 487 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 317 378 IPR036638 GO:0046983
Arst1g01604 487 PANTHER BHLH TRANSCRIPTION FACTOR 197 484 - -
Arst1g01604 487 Pfam Helix-loop-helix DNA-binding domain 317 361 IPR011598 GO:0046983
Arst1g01604 487 SMART finulus 318 367 IPR011598 GO:0046983
Arst1g01604 487 MobiDBLite consensus disorder prediction 274 309 - -
Arst1g01604 487 Coils Coil 351 378 - -
Arst1g01604 487 Gene3D - 305 379 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01604 Arst-Chr1 24453848 24470105 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01604 287 481 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.050 4.24e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst1g01604 HLH 2.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01604 - - adu:107482811 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01604 1 24453848 24470105 Arst1g01604 1 24453848 24470105 ECH
Arst5g00668 5 5657236 5659121 Arst1g01604 1 24453848 24470105 PCT