Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01596 ATGCGCCTCTTCCTCTTCCACTTCCTCTTCTTCCTCCTCTGCCTCCATCTCACGGCCCACTCCGCCCACATCTCCGAGCGCCGTGCCCTGCTCTCCTTCAAAGCCGCCTCCATTACCTCCGATCCCACCTCCGCTCTCTCCTCCTGGTCCCCCACCTCCCCCTCCGACCACTGCACATGGCGCGGCGTCTCCTGCGACCACCACCTCCGCCACGTCACCTCCCTCAACCTCTCTTCCCTCTCCCTCTCCGGCACTCTCTCCGGCGACCACCTCTCCCTCCTCCCCTTTCTCACCAACCTCTCCCTCTCCGATAACAAATTCTCCGGCCCTATTCCCAGTTCCCTCTCCTCTCTCACAAACCTCCGCTTCCTCAACCTCTCTAACAACATCTTCAACGGAACCTTCCCTAATGAACTTTCCATTCTTCACACTGTTGAAGTTCTTGACCTTTACAATAACAACTTGACCGGTCTTCTTCCCCTCGCCGTCACCGACATGACTGAGCTTCGCCACTTGCACCTCGGCGGAAACTTCTTCTCCGGCGAAATTCCGCGGGAGTACGGCAAATGGCAGAAGCTGGAGTACCTTGCGGTTTCCGGTAACGAGCTTGTCGGGAAAATCCCGCCGGAGATCGGAAACCTTAGCTCCCTCCAGGAGCTTTATGTAGGGTACTACAACACTTACGACGGCGGAATACCGCCGGAGATCGGGAATTTGTCCGAGCTTGTCAGGCTCGACGCCGCGTACTGTGGACTCTCCGGCGAGATTCCGGCGGAGATAGGGAGGCTTCAGAAGCTCGACACCCTCTTCCTCCAGGTGAATGCGCTTTTCGGTTCACTAACTACGGAGCTTGGGAGCCTTAAAAGTCTAAAATCAATGGATTTATCGAACAATATGCTCGCCGGCGAGATTCCCGCGAGCTTTTCGGCGCTGAAGAACATAACTCTCGTGAACCTCTTCCGCAACAAGCTCCACGGTGAGATACCGGAGTTCATCGGTGAGCTTCCGTCGCTGGAGGTGCTTCAGCTGTGGGACAACAACTTCACCGGAAGCATTCCTCAGAATTTGGGGAAGAACGGCAGGCTCACGATCGTTGACCTCTCGTCGAACAAGCTTACAGGAACTTTGCCACCGTTAATGTGTTCCGGTAACCGTCTTCAGACACTGATAACTCTCGGTAACTTCCTCTTTGGTCCAATTCCTGATTCACTCGGAAAGTGTGAGTCTCTGAGTAGGGTGAGAATGGGTGAAAATTTCTTGAACGGTTCAATCCCTAAGGGTCTGTTTGGGCTTCCGAAACTGACACAGGTTGAACTTCAGGATAATCTTCTGACCGGAGAGTTTCCTGTTTCTGGTTCCGTTGCACCGAACTTGGGGCAAATTAGTCTTTCCAATAACAAGCTTTCAGGGCCGTTACCACCGTCCATTGGGAACTTCTCCAGCATGCAGAAGCTTCTACTAGACGGGAACCGGTTCTCGGGCCGGATCCCATCGGAGATTGGCAGGCTACAGCAGCTCTCCAAGATGGATTTCAGCAATAATAAGTTCTCTGGTCCGGTTGCACCGGAGATCAGCCGGTGCAAGTTGTTGACATTCGTTGATCTCAGCCGCAACGAACTCTCCGGCGAGGTTCCAAATGAGATCACTGGAATGCGGATACTGAACTATATGAACCTTTCAAGGAACCACTTGGTTGGTCCAATTCCGGGATCTATTGCTTCCATGCAGAGTTTAACATCGGTGGATTTTTCTTACAACAATCTCTCTGGTTTGGTTCCTGGCACTGGCCAATTCAGTTACTTCAACTATACCTCTTTCTTGGGAAACCCCGAACTCTGTGGCCCTTATTTAGGTCCTTGCAAAGACGGTGTTGTCAATGGCCCTCGTCAACCTCATGTTAAGGGTCCACTGTCTTCTTCCTTGAAGCTATTGCTGGTTATTGGGCTTCTTGTTTGCTCTATCTTGTTCGCTGTGGCGGCAATCTTCAAGGCGCGGTCCCTGAAGAAGGCGAGCGAGGCGCGCGCCTGGAAGCTCACGGCGTTCCAGCGATTGGACTTCACTGTGGACGATGTTCTGGATTGCTTGAAGGAGGATAACGTCATAGGAAAAGGAGGTGCTGGAATTGTGTACAAAGGGGCCATGGCGAATGGGGATCAAGTTGCTGTAAAGAGGTTACCGGCTATGAGTAGAGGATCATCCCATGATCATGGTTTCAATGCTGAGATTCAAACTTTGGGGAGGATTCGACACAGGCACATTGTTAGGTTGTTGGGGTTCTGTTCGAACCACGAGACGAATCTTCTTGTGTATGAGTACATGCCTAATGGAAGCTTGGGTGAGGTTCTTCATGGGAAGAAAGGGGGTCACTTACATTGGGACACAAGGTACAAGATTGCTGTGGAGGCTGCAAAGGGGCTTTGTTACTTGCATCATGATTGTTCGCCGCTTATTGTGCACCGCGATGTCAAGTCGAACAATATCCTTCTTGATTCCAGCTTTGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCCTCCAAGATTCTGGAACATCTGAATGCATGTCCGCTATTGCCGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACTTTGAAAGTTGATGAGAAGAGCGATGTGTACAGCTTTGGCGTTGTTCTTTTGGAGCTTGTAACCGGAAGGAAACCGGTTGGTGAGTTCGGTGACGGCGTGGACATTGTGCAATGGGTGAGGAAAATGACAGACTCAAACAAGGAAGGAGTGCTTAAGGTTCTTGATCCTAGGCTTCCCTCAGTTCCCCTCCATGAGGTGATGCACGTTTTCTATGTCGCCATGCTGTGTGTCGAAGAACAAGCCGTAGAGCGCCCAACCATGCGCGAAGTGGTTCAAATTCTCACCGAGCTTCCAAAGCCACCGGGATCTAAGCAGGGAGATTCAACAATCACCGAGTCCTCATCATTGTCATCATCAAACAGCTTAGAGTCTCCAATGGCCACATCATTGAAAGAGCATACTAAAGATAATCAAAACCCTCCCAAGTCACCGCCACCAGATCTTCTTAGCATCTAA 3072 0.5117 MRLFLFHFLFFLLCLHLTAHSAHISERRALLSFKAASITSDPTSALSSWSPTSPSDHCTWRGVSCDHHLRHVTSLNLSSLSLSGTLSGDHLSLLPFLTNLSLSDNKFSGPIPSSLSSLTNLRFLNLSNNIFNGTFPNELSILHTVEVLDLYNNNLTGLLPLAVTDMTELRHLHLGGNFFSGEIPREYGKWQKLEYLAVSGNELVGKIPPEIGNLSSLQELYVGYYNTYDGGIPPEIGNLSELVRLDAAYCGLSGEIPAEIGRLQKLDTLFLQVNALFGSLTTELGSLKSLKSMDLSNNMLAGEIPASFSALKNITLVNLFRNKLHGEIPEFIGELPSLEVLQLWDNNFTGSIPQNLGKNGRLTIVDLSSNKLTGTLPPLMCSGNRLQTLITLGNFLFGPIPDSLGKCESLSRVRMGENFLNGSIPKGLFGLPKLTQVELQDNLLTGEFPVSGSVAPNLGQISLSNNKLSGPLPPSIGNFSSMQKLLLDGNRFSGRIPSEIGRLQQLSKMDFSNNKFSGPVAPEISRCKLLTFVDLSRNELSGEVPNEITGMRILNYMNLSRNHLVGPIPGSIASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVVNGPRQPHVKGPLSSSLKLLLVIGLLVCSILFAVAAIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDCLKEDNVIGKGGAGIVYKGAMANGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKQGDSTITESSSLSSSNSLESPMATSLKEHTKDNQNPPKSPPPDLLSI 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01596 1023 Pfam Leucine Rich Repeat 289 311 IPR001611 GO:0005515
Arst1g01596 1023 SUPERFAMILY Protein kinase-like (PK-like) 688 966 IPR011009 -
Arst1g01596 1023 Gene3D Ribonuclease Inhibitor 530 620 IPR032675 -
Arst1g01596 1023 SMART serkin_6 695 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01596 1023 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Arst1g01596 1023 SUPERFAMILY L domain-like 360 620 - -
Arst1g01596 1023 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 339 624 - -
Arst1g01596 1023 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 226 968 - -
Arst1g01596 1023 SMART LRR_typ_2 166 190 IPR003591 -
Arst1g01596 1023 SMART LRR_typ_2 575 598 IPR003591 -
Arst1g01596 1023 SMART LRR_typ_2 142 165 IPR003591 -
Arst1g01596 1023 SMART LRR_typ_2 94 118 IPR003591 -
Arst1g01596 1023 SMART LRR_typ_2 335 359 IPR003591 -
Arst1g01596 1023 SMART LRR_typ_2 479 503 IPR003591 -
Arst1g01596 1023 SMART LRR_typ_2 287 311 IPR003591 -
Arst1g01596 1023 Gene3D Ribonuclease Inhibitor 228 381 IPR032675 -
Arst1g01596 1023 ProSiteProfiles Protein kinase domain profile. 695 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01596 1023 MobiDBLite consensus disorder prediction 974 1006 - -
Arst1g01596 1023 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 664 772 - -
Arst1g01596 1023 Gene3D Phosphorylase Kinase; domain 1 661 772 - -
Arst1g01596 1023 Pfam Protein tyrosine and serine/threonine kinase 696 966 IPR001245 GO:0004672|GO:0006468
Arst1g01596 1023 SUPERFAMILY RNI-like 74 397 - -
Arst1g01596 1023 MobiDBLite consensus disorder prediction 967 1023 - -
Arst1g01596 1023 Gene3D Transferase(Phosphotransferase) domain 1 773 986 - -
Arst1g01596 1023 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 773 983 - -
Arst1g01596 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Arst1g01596 1023 Gene3D Ribonuclease Inhibitor 25 141 IPR032675 -
Arst1g01596 1023 Gene3D Ribonuclease Inhibitor 456 528 IPR032675 -
Arst1g01596 1023 Gene3D Ribonuclease Inhibitor 382 455 IPR032675 -
Arst1g01596 1023 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 88 331 - -
Arst1g01596 1023 Gene3D Ribonuclease Inhibitor 142 227 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01596 Arst-Chr1 23678104 23682171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01596 16 997 Receptor kinase-like Gene Family AT5G65700 80.061 0.0 1578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst1g01596 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01596 - - gmx:100499646 1683.31