Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01581 ATGGACACGCCGGAGAGGAACCAGATCAACCCTCCCTTCTCTCGTGTCGAGGATTCCCCTGTATTCAGTTTTATCAACAGTTTGTCGCCTATAAAGCCCGTGAAGTCTGCCCAGGTTGGTCAAACATTCAGCTCGCTTAGCTTTCCTTCCCCTCCGCGTGCTTTTACTTCATCCAATCTCACCTGTTTCAAGGAATCAAAAGTTCTCAGGAGGCATAACCCTTTTGGGGCATCAAGGCCTGGGTTGTCATCTGAAGATGGTAATAAATTTCAGACAAGTGAAGAGGCTATTGCAGATTCATTTCATCCATATAATAACTCGAGGGAATCTCAGGGAAATTTTCATGATGGAATATCTGTAGTTGATGATTCGATTGCTCTACCTGGTGAGCACACAGACTTCTCAGCTGAGATACTACAGGCCTTAAATTATAATAATTGTGGTAACCCTGGCTCTGATCCTGGTCATGAGGCTAACTCTCTTGAAGTCTTTAATCAGGGGTTGTGTCAATTTGATCCGAAGGGCCAAGAATCAGAGTGTAATTGGGATAATTTAATCTCTGGAGATACTGATTTCTTCGTTTTCAATTCCCCAAATGACGCAGCTTTTAAGGGTATAATGCAGAAACCAGATTCTCATTTTATGTCTCTGGTACCGGAATCTTCCATATATAATGGTCTGAGAGATAGCAAACTTAAAATAGAAGATTATCGTCCTGAGCCTTTAGCAATCACAGGCCAAATGCAGGACAAACACTGCGTTGCCATGACTAGCAAAATAAAGGAAAAACCAGATGTTGAGCTTGTTTCTGTGATGAACCGTGGTACACGGAGGCGATGTCTAAACTTTGAGACTGACAGTGTGCAAAGGAAGAACTCAGATGATAATTTAAAATCCGGTTCTCTTGGATATGAAAAACAATTGGTTTCGGCAAAACGCAAAAGCAGTTCACAGCAATGCACTATGCCTGCAGTTGGCTTACATTTGAATGCACCCGACAAAGAAGTCATAAGTAATGACGAGTCGTCTTGTGGAATTCATCTTAATGTTCCCAGTTGCACTTCCGTGCAAATCTATACCAGCTATGAACATCAGGAACCACTGGCAATAGGAGTGGATTCATCAAACATTGGGCCTGAGCCAGCTAAGGATAATTCTCATGCATTATATTCCACTGTTAATGATGTCAGTCAGAATAGTCCCAAAAAGAAAAGACATGGAGACTGCAAGCGTTGCAAGTGCAAGAAATCAAAGTGTTTGAAGTTATATTGTGAGTGCTTTGCTGCTCGGGCCTACTGTACAGGCAACTGCTCATGTAAGGATTGCTACAACAAACTTGTTCATAAAGACAAAGTCATTCAAGTTCGCAAGCAGATCGAGTCTCGCAATCCTCTGGCTTTTGCTCCTAAAGTCATTGCTGAACCTGAAATTGGGAATGATCCAAATAAAACTCCAGCACCAGCACGACACAAGAGAGGATGCAACTGTAAGCAATCAGTCTGCCTAAAGAAATACTGTGAATGCTTTCAGGCTGGTGTTGGATGCTCCTTAAGCTGTAGATGTGAAGGGTGTAAGAACACATTTGGTAGAAAGGACGGCGCTAATTCTATAGGAGTAGAAGCCCAGCTAGAAGTAGAAATAGAGGTCTGTGGAAAAGTTGTTGAAAAAGTATCACAGAGAATTGAAGTTCAGAACTCCGATAATCATCCAGATTTTGTTCCAATCTCTACGCCATTCCCGCTGTTTAGTTCATTGTCAGAGGGGAAACCAAACACTCGTTGGTCTCAACCACCTAAGCATTCTCAAGCTGTTTCGGACCAGGAAATGACAGATGTTCTTGGAGGCGGAGGCAGAAGTGATAGGTCTCCCATGACCATCAAAACTTCTTCTCCAAGTGGGAAGAGGATTTCCACTTCTAAGGGTGACTTGACACTTTCTTTTCCTTCTCCTAATCGTCATCAATAG 1965 0.4265 MDTPERNQINPPFSRVEDSPVFSFINSLSPIKPVKSAQVGQTFSSLSFPSPPRAFTSSNLTCFKESKVLRRHNPFGASRPGLSSEDGNKFQTSEEAIADSFHPYNNSRESQGNFHDGISVVDDSIALPGEHTDFSAEILQALNYNNCGNPGSDPGHEANSLEVFNQGLCQFDPKGQESECNWDNLISGDTDFFVFNSPNDAAFKGIMQKPDSHFMSLVPESSIYNGLRDSKLKIEDYRPEPLAITGQMQDKHCVAMTSKIKEKPDVELVSVMNRGTRRRCLNFETDSVQRKNSDDNLKSGSLGYEKQLVSAKRKSSSQQCTMPAVGLHLNAPDKEVISNDESSCGIHLNVPSCTSVQIYTSYEHQEPLAIGVDSSNIGPEPAKDNSHALYSTVNDVSQNSPKKKRHGDCKRCKCKKSKCLKLYCECFAARAYCTGNCSCKDCYNKLVHKDKVIQVRKQIESRNPLAFAPKVIAEPEIGNDPNKTPAPARHKRGCNCKQSVCLKKYCECFQAGVGCSLSCRCEGCKNTFGRKDGANSIGVEAQLEVEIEVCGKVVEKVSQRIEVQNSDNHPDFVPISTPFPLFSSLSEGKPNTRWSQPPKHSQAVSDQEMTDVLGGGGRSDRSPMTIKTSSPSGKRISTSKGDLTLSFPSPNRHQ 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01581 654 MobiDBLite consensus disorder prediction 622 654 - -
Arst1g01581 654 ProSiteProfiles CRC domain profile. 408 529 IPR005172 -
Arst1g01581 654 SMART CXC_2 489 530 IPR033467 -
Arst1g01581 654 SMART CXC_2 407 448 IPR033467 -
Arst1g01581 654 MobiDBLite consensus disorder prediction 586 654 - -
Arst1g01581 654 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 410 445 IPR005172 -
Arst1g01581 654 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 492 527 IPR005172 -
Arst1g01581 654 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 641 IPR044522 GO:0003700
Arst1g01581 654 MobiDBLite consensus disorder prediction 586 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01581 Arst-Chr1 22815614 22820630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01581 16 582 CPP Transcription Factor Family AT4G14770 37.311 6.85e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst1g01581 TCR 7.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01581 - - aip:107628213 1249.19