Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01579 ATGAGACAGAATGCAATTTCAGATCATACAATTGTCCTTATGCTGGATCAGAGTGCTCTGTTGCCGGGAACATTCCTTTCCTTGTTGCACATCTGCACAGGATGCATATTCAACCACCGATATGTAAAATCAAATCCCCATGAAGTTGAGAATGCAACATGGATGCTCATGCCACGCACAACACTAGTTATGGACACGCCGGAGAGGAACCAGATCAACCCTCCCTTCTCTCGTGTCGAGGATTCCCCTGTATTCAGTTTTATCAACAGTTTGTCGCCTATAAAGCCCGTGAAGTCTGCCCAGGTTGGTCAAACATTCAGCTCGCTTAGCTTTCCTTCCCCTCCGCGTGCTTTTACTTCATCCAATCTCACCTGTTTCAAGGAATCAAAAGTTCTCAGGAGGCATAACCCTTTTGGGGCATCAAGGCCTGGGTTGTCATCTGAAGATGGTAATAAATTTCAGACAAGTGAAGAGGCTATTGCAGATTCATTTCATCCATATAATAACTCGAGGGAATCTCAGGGAAATTTTCATGATGGAATATCTGTAGTTGATGATTCGATTGCTCTACCTGGTGAGCACACAGACTTCTCAGCTGAGATACTACAGGCCTTAAATTATAATAATTGTGGTAACCCTGGCTCTGATCCTGGTCATGAGGCTAACTCTCTTGAAGTCTTTAATCAGGGGTTGTGTCAATTTGATCCGAAGGGCCAAGAATCAGAGTGTAATTGGGATAATTTAATCTCTGGAGATACTGATTTCTTCGTTTTCAATTCCCCAAATGACGCAGCTTTTAAGGGTATAATGCAGAAACCAGATTCTCATTTTATGTCTCTGGTACCGGAATCTTCCATATATAATGGTCTGAGAGATAGCAAACTTAAAATAGAAGATTATCGTCCTGAGCCTTTAGCAATCACAGGCCAAATGCAGGACAAACACTGCGTTGCCATGACTAGCAAAATAAAGGAAAAACCAGATGTTGAGCTTGTTTCTGTGATGAACCGTGGTACACGGAGGCGATGTCTAAACTTTGAGACTGACAGTGTGCAAAGGAAGAACTCAGATGATAATTTAAAATCCGGTTCTCTTGGATATGAAAAACAATTGGTTTCGGCAAAACGCAAAAGCAGTTCACAGCAATGCACTATGCCTGCAGTTGGCTTACATTTGAATGCACCCGACAAAGAAGTCATAAGTAATGACGAGTCGTCTTGTGGAATTCATCTTAATGTTCCCAGTTGCACTTCCGTGCAAATCTATACCAGCTATGAACATCAGGAACCACTGGCAATAGGAGTGGATTCATCAAACATTGGGCCTGAGCCAGCTAAGGATAATTCTCATGCATTATATTCCACTGTTAATGATGTCAGTCAGAATAGTCCCAAAAAGAAAAGACATGGAGACTGCAAGCGTTGCAAGTGCAAGAAATCAAAGTGTTTGAAGTTATATTGTGAGTGCTTTGCTGCTCGGGCCTACTGTACAGGCAACTGCTCATGTAAGGATTGCTACAACAAACTTGTTCATAAAGACAAAGTCATTCAAGTTCGCAAGCAGATCGAGTCTCGCAATCCTCTGGCTTTTGCTCCTAAAGTCATTGCTGAACCTGAAATTGGGAATGATCCAAATAAAACTCCAGCACCAGCACGACACAAGAGAGGATGCAACTGTAAGCAATCAGTCTGCCTAAAGAAATACTGTGAATGCTTTCAGGCTGGTGTTGGATGCTCCTTAAGCTGTAGATGTGAAGGGTGTAAGAACACATTTGGTAGAAAGGACGGCGCTAATTCTATAGGAGTAGAAGCCCAGCTAGAAGTAGAAATAGAGGTCTGTGGAAAAGTTGTTGAAAAAGTATCACAGAGAATTGAAGTTCAGAACTCCGATAATCATCCAGATTTTGTTCCAATCTCTACGCCATTCCCGCTGTTTAGTTCATTGTCAGAGGGGAAACCAAACACTCGTTGGTCTCAACCACCTAAGCATTCTCAAGCTGTTTCGGACCAGGAAATGACAGATGTTCTTGGAGGCGGAGGCAGAAGTGATAGGTCTCCCATGACCATCAAAACTTCTTCTCCAAGTGGGAAGAGGATTTCCACTTCTAAGGGTGACTTGACACTTTCTTTTCCTTCTCCTAATCGTCATCAATAG 2154 0.4266 MRQNAISDHTIVLMLDQSALLPGTFLSLLHICTGCIFNHRYVKSNPHEVENATWMLMPRTTLVMDTPERNQINPPFSRVEDSPVFSFINSLSPIKPVKSAQVGQTFSSLSFPSPPRAFTSSNLTCFKESKVLRRHNPFGASRPGLSSEDGNKFQTSEEAIADSFHPYNNSRESQGNFHDGISVVDDSIALPGEHTDFSAEILQALNYNNCGNPGSDPGHEANSLEVFNQGLCQFDPKGQESECNWDNLISGDTDFFVFNSPNDAAFKGIMQKPDSHFMSLVPESSIYNGLRDSKLKIEDYRPEPLAITGQMQDKHCVAMTSKIKEKPDVELVSVMNRGTRRRCLNFETDSVQRKNSDDNLKSGSLGYEKQLVSAKRKSSSQQCTMPAVGLHLNAPDKEVISNDESSCGIHLNVPSCTSVQIYTSYEHQEPLAIGVDSSNIGPEPAKDNSHALYSTVNDVSQNSPKKKRHGDCKRCKCKKSKCLKLYCECFAARAYCTGNCSCKDCYNKLVHKDKVIQVRKQIESRNPLAFAPKVIAEPEIGNDPNKTPAPARHKRGCNCKQSVCLKKYCECFQAGVGCSLSCRCEGCKNTFGRKDGANSIGVEAQLEVEIEVCGKVVEKVSQRIEVQNSDNHPDFVPISTPFPLFSSLSEGKPNTRWSQPPKHSQAVSDQEMTDVLGGGGRSDRSPMTIKTSSPSGKRISTSKGDLTLSFPSPNRHQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01579 717 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 64 704 IPR044522 GO:0003700
Arst1g01579 717 MobiDBLite consensus disorder prediction 649 671 - -
Arst1g01579 717 MobiDBLite consensus disorder prediction 685 717 - -
Arst1g01579 717 ProSiteProfiles CRC domain profile. 471 592 IPR005172 -
Arst1g01579 717 MobiDBLite consensus disorder prediction 649 717 - -
Arst1g01579 717 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 555 590 IPR005172 -
Arst1g01579 717 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 473 508 IPR005172 -
Arst1g01579 717 SMART CXC_2 470 511 IPR033467 -
Arst1g01579 717 SMART CXC_2 552 593 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01579 Arst-Chr1 22813191 22820630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01579 79 645 CPP Transcription Factor Family AT4G14770 37.311 5.15e-95 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst1g01579 TCR 8.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01579 - - aip:107628213 1368.21