Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01578 ATGAGACAGAATGCAATTTCAGATCATACAATTGTCCTTATGCTGGATCAGAGTGCTCTGTTGCCGGGAACATTCCTTTCCTTGTTGCACATCTGCACAGGATGCATATTCAACCACCGATATGTAAAATCAAATCCCCATGAAGTTGAGAATGCAACATGGATGCTCATGGATTCCCCTGTATTCAGTTTTATCAACAGTTTGTCGCCTATAAAGCCCGTGAAGTCTGCCCAGGTTGGTCAAACATTCAGCTCGCTTAGCTTTCCTTCCCCTCCGCGTGCTTTTACTTCATCCAATCTCACCTGTTTCAAGGAATCAAAAGTTCTCAGGAGGCATAACCCTTTTGGGGCATCAAGGCCTGGGTTGTCATCTGAAGATGGTAATAAATTTCAGACAAGTGAAGAGGCTATTGCAGATTCATTTCATCCATATAATAACTCGAGGGAATCTCAGGGAAATTTTCATGATGGAATATCTGTAGTTGATGATTCGATTGCTCTACCTGGTGAGCACACAGACTTCTCAGCTGAGATACTACAGGCCTTAAATTATAATAATTGTGGTAACCCTGGCTCTGATCCTGGTCATGAGGCTAACTCTCTTGAAGTCTTTAATCAGGGGTTGTGTCAATTTGATCCGAAGGGCCAAGAATCAGAGTGTAATTGGGATAATTTAATCTCTGGAGATACTGATTTCTTCGTTTTCAATTCCCCAAATGACGCAGCTTTTAAGGGTATAATGCAGAAACCAGATTCTCATTTTATGTCTCTGGTACCGGAATCTTCCATATATAATGGTCTGAGAGATAGCAAACTTAAAATAGAAGATTATCGTCCTGAGCCTTTAGCAATCACAGGCCAAATGCAGGACAAACACTGCGTTGCCATGACTAGCAAAATAAAGGAAAAACCAGATGTTGAGCTTGTTTCTGTGATGAACCGTGGTACACGGAGGCGATGTCTAAACTTTGAGACTGACAGTGTGCAAAGGAAGAACTCAGATGATAATTTAAAATCCGGTTCTCTTGGATATGAAAAACAATTGGTTTCGGCAAAACGCAAAAGCAGTTCACAGCAATGCACTATGCCTGCAGTTGGCTTACATTTGAATGCACCCGACAAAGAAGTCATAAGTAATGACGAGTCGTCTTGTGGAATTCATCTTAATGTTCCCAGTTGCACTTCCGTGCAAATCTATACCAGCTATGAACATCAGGAACCACTGGCAATAGGAGTGGATTCATCAAACATTGGGCCTGAGCCAGCTAAGGATAATTCTCATGCATTATATTCCACTGTTAATGATGTCAGTCAGAATAGTCCCAAAAAGAAAAGACATGGAGACTGCAAGCGTTGCAAGTGCAAGAAATCAAAGTGTTTGAAGTTATATTGTGAGTGCTTTGCTGCTCGGGCCTACTGTACAGGCAACTGCTCATGTAAGGATTGCTACAACAAACTTGTTCATAAAGACAAAGTCATTCAAGTTCGCAAGCAGATCGAGTCTCGCAATCCTCTGGCTTTTGCTCCTAAAGTCATTGCTGAACCTGAAATTGGGAATGATCCAAATAAAACTCCAGCACCAGCACGACACAAGAGAGGATGCAACTGTAAGCAATCAGTCTGCCTAAAGAAATACTGTGAATGCTTTCAGGCTGGTGTTGGATGCTCCTTAAGCTGTAGATGTGAAGGGTGTAAGAACACATTTGGTAGAAAGGACGGCGCTAATTCTATAGGAGTAGAAGCCCAGCTAGAAGTAGAAATAGAGGTCTGTGGAAAAGTTGTTGAAAAAGTATCACAGAGAATTGAAGTTCAGAACTCCGATAATCATCCAGATTTTGTTCCAATCTCTACGCCATTCCCGCTGTTTAGTTCATTGTCAGAGGGGAAACCAAACACTCGTTGGTCTCAACCACCTAAGCATTCTCAAGCTGTTTCGGACCAGGAAATGACAGATGTTCTTGGAGGCGGAGGCAGAAGTGATAGGTCTCCCATGACCATCAAAACTTCTTCTCCAAGTGGGAAGAGGATTTCCACTTCTAAGGGTGACTTGACACTTTCTTTTCCTTCTCCTAATCGTCATCAATAG 2085 0.4221 MRQNAISDHTIVLMLDQSALLPGTFLSLLHICTGCIFNHRYVKSNPHEVENATWMLMDSPVFSFINSLSPIKPVKSAQVGQTFSSLSFPSPPRAFTSSNLTCFKESKVLRRHNPFGASRPGLSSEDGNKFQTSEEAIADSFHPYNNSRESQGNFHDGISVVDDSIALPGEHTDFSAEILQALNYNNCGNPGSDPGHEANSLEVFNQGLCQFDPKGQESECNWDNLISGDTDFFVFNSPNDAAFKGIMQKPDSHFMSLVPESSIYNGLRDSKLKIEDYRPEPLAITGQMQDKHCVAMTSKIKEKPDVELVSVMNRGTRRRCLNFETDSVQRKNSDDNLKSGSLGYEKQLVSAKRKSSSQQCTMPAVGLHLNAPDKEVISNDESSCGIHLNVPSCTSVQIYTSYEHQEPLAIGVDSSNIGPEPAKDNSHALYSTVNDVSQNSPKKKRHGDCKRCKCKKSKCLKLYCECFAARAYCTGNCSCKDCYNKLVHKDKVIQVRKQIESRNPLAFAPKVIAEPEIGNDPNKTPAPARHKRGCNCKQSVCLKKYCECFQAGVGCSLSCRCEGCKNTFGRKDGANSIGVEAQLEVEIEVCGKVVEKVSQRIEVQNSDNHPDFVPISTPFPLFSSLSEGKPNTRWSQPPKHSQAVSDQEMTDVLGGGGRSDRSPMTIKTSSPSGKRISTSKGDLTLSFPSPNRHQ 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01578 694 MobiDBLite consensus disorder prediction 662 694 - -
Arst1g01578 694 ProSiteProfiles CRC domain profile. 448 569 IPR005172 -
Arst1g01578 694 MobiDBLite consensus disorder prediction 626 694 - -
Arst1g01578 694 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 52 681 IPR044522 GO:0003700
Arst1g01578 694 SMART CXC_2 447 488 IPR033467 -
Arst1g01578 694 SMART CXC_2 529 570 IPR033467 -
Arst1g01578 694 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 532 567 IPR005172 -
Arst1g01578 694 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 450 485 IPR005172 -
Arst1g01578 694 MobiDBLite consensus disorder prediction 626 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01578 Arst-Chr1 22813191 22820630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01578 56 622 CPP Transcription Factor Family AT4G14770 37.311 2.55e-95 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst1g01578 TCR 7.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01578 - - aip:107628213 1308.12