Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01577 ATGAGACAGAATGCAATTTCAGATCATACAATTGTCCTTATGCTGGATCAGAGTGCTCTGTTGCCGGGAACATTCCTTTCCTTGTTGCACATCTGCACAGGATGCATATTCAACCACCGATATGTAAAATCAAATCCCCATGAAGTTGAGAATGCAACATGGATGCTCATGCCACGCACAACACTAGTTATGGACACGCCGGAGAGGAACCAGATCAACCCTCCCTTCTCTCGTGTCGAGGATTCCCCTGTATTCAGTTTTATCAACAGTTTGTCGCCTATAAAGCCCGTGAAGTCTGCCCAGGTTGGTCAAACATTCAGCTCGCTTAGCTTTCCTTCCCCTCCGCGTGCTTTTACTTCATCCAATCTCACCTGTTTCAAGGAATCAAAAGTTCTCAGGAGGCATAACCCTTTTGGGGCATCAAGGCCTGGGTTGTCATCTGAAGATGGTAATAAATTTCAGACAAGTGAAGAGGCTATTGCAGATTCATTTCATCCATATAATAACTCGAGGGAATCTCAGGGAAATTTTCATGATGGAATATCTGTAGTTGATGATTCGATTGCTCTACCTGCTTTTAAGGGTATAATGCAGAAACCAGATTCTCATTTTATGTCTCTGGTACCGGAATCTTCCATATATAATGGTCTGAGAGATAGCAAACTTAAAATAGAAGATTATCGTCCTGAGCCTTTAGCAATCACAGGCCAAATGCAGGACAAACACTGCGTTGCCATGACTAGCAAAATAAAGGAAAAACCAGATGTTGAGCTTGTTTCTGTGATGAACCGTGGTACACGGAGGCGATGTCTAAACTTTGAGACTGACAGTGTGCAAAGGAAGAACTCAGATGATAATTTAAAATCCGGTTCTCTTGGATATGAAAAACAATTGGTTTCGGCAAAACGCAAAAGCAGTTCACAGCAATGCACTATGCCTGCAGTTGGCTTACATTTGAATGCACCCGACAAAGAAGTCATAAGTAATGACGAGTCGTCTTGTGGAATTCATCTTAATGTTCCCAGTTGCACTTCCGTGCAAATCTATACCAGCTATGAACATCAGGAACCACTGGCAATAGGAGTGGATTCATCAAACATTGGGCCTGAGCCAGCTAAGGATAATTCTCATGCATTATATTCCACTGTTAATGATGTCAGTCAGAATAGTCCCAAAAAGAAAAGACATGGAGACTGCAAGCGTTGCAAGTGCAAGAAATCAAAGTGTTTGAAGTTATATTGTGAGTGCTTTGCTGCTCGGGCCTACTGTACAGGCAACTGCTCATGTAAGGATTGCTACAACAAACTTGTTCATAAAGACAAAGTCATTCAAGTTCGCAAGCAGATCGAGTCTCGCAATCCTCTGGCTTTTGCTCCTAAAGTCATTGCTGAACCTGAAATTGGGAATGATCCAAATAAAACTCCAGCACCAGCACGACACAAGAGAGGATGCAACTGTAAGCAATCAGTCTGCCTAAAGAAATACTGTGAATGCTTTCAGGCTGGTGTTGGATGCTCCTTAAGCTGTAGATGTGAAGGGTGTAAGAACACATTTGGTAGAAAGGACGGCGCTAATTCTATAGGAGTAGAAGCCCAGCTAGAAGTAGAAATAGAGGTCTGTGGAAAAGTTGTTGAAAAAGTATCACAGAGAATTGAAGTTCAGAACTCCGATAATCATCCAGATTTTGTTCCAATCTCTACGCCATTCCCGCTGTTTAGTTCATTGTCAGAGGGGAAACCAAACACTCGTTGGTCTCAACCACCTAAGCATTCTCAAGCTGTTTCGGACCAGGAAATGACAGATGTTCTTGGAGGCGGAGGCAGAAGTGATAGGTCTCCCATGACCATCAAAACTTCTTCTCCAAGTGGGAAGAGGATTTCCACTTCTAAGGGTGACTTGACACTTTCTTTTCCTTCTCCTAATCGTCATCAATAG 1935 0.4279 MRQNAISDHTIVLMLDQSALLPGTFLSLLHICTGCIFNHRYVKSNPHEVENATWMLMPRTTLVMDTPERNQINPPFSRVEDSPVFSFINSLSPIKPVKSAQVGQTFSSLSFPSPPRAFTSSNLTCFKESKVLRRHNPFGASRPGLSSEDGNKFQTSEEAIADSFHPYNNSRESQGNFHDGISVVDDSIALPAFKGIMQKPDSHFMSLVPESSIYNGLRDSKLKIEDYRPEPLAITGQMQDKHCVAMTSKIKEKPDVELVSVMNRGTRRRCLNFETDSVQRKNSDDNLKSGSLGYEKQLVSAKRKSSSQQCTMPAVGLHLNAPDKEVISNDESSCGIHLNVPSCTSVQIYTSYEHQEPLAIGVDSSNIGPEPAKDNSHALYSTVNDVSQNSPKKKRHGDCKRCKCKKSKCLKLYCECFAARAYCTGNCSCKDCYNKLVHKDKVIQVRKQIESRNPLAFAPKVIAEPEIGNDPNKTPAPARHKRGCNCKQSVCLKKYCECFQAGVGCSLSCRCEGCKNTFGRKDGANSIGVEAQLEVEIEVCGKVVEKVSQRIEVQNSDNHPDFVPISTPFPLFSSLSEGKPNTRWSQPPKHSQAVSDQEMTDVLGGGGRSDRSPMTIKTSSPSGKRISTSKGDLTLSFPSPNRHQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01577 644 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 64 185 IPR044522 GO:0003700
Arst1g01577 644 MobiDBLite consensus disorder prediction 612 644 - -
Arst1g01577 644 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 482 517 IPR005172 -
Arst1g01577 644 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 400 435 IPR005172 -
Arst1g01577 644 SMART CXC_2 479 520 IPR033467 -
Arst1g01577 644 SMART CXC_2 397 438 IPR033467 -
Arst1g01577 644 MobiDBLite consensus disorder prediction 576 644 - -
Arst1g01577 644 ProSiteProfiles CRC domain profile. 398 519 IPR005172 -
Arst1g01577 644 MobiDBLite consensus disorder prediction 576 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01577 Arst-Chr1 22813191 22820630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01577 79 524 CPP Transcription Factor Family AT4G14770 38.627 1.39e-80 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst1g01577 TCR 7.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01577 - - aip:107628213 970.304