Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01564 ATGATGAGGCTGAAGACATATGCCGGTCTCAGTTTGATCGCAACCCTGGCTATCACATATCATGCATTTAACAGTAGAGGCCAGTTTTATCCGGCAATGGTGTATCTTTCAACTTCCAAGATCAGCTTAGTGCTTCTTCTCAACATGGGTTTGGTTATTATGTGTATTCTATGGCAGTTGACTAAAAAGGTATTCCTGGGTTCTCTTAGAGAAGCTGAGGTAGAAAGGCTTAACGAGCAATCGTGGAGGGAGGTTATGGAAATCCTCTTTGCCATTACTATTTTTAGGCAGGATTTCTCAGTTACATTTCTTGCGATGGTCACAGCGCTATTGTTGATTAAAGCTTTGCATTGGTTGGCTCAAAAGAGGGTTGAGTACATTGAGACAACTCCTACGGTGCCCATGTTGTCCCATGTTCGGATTGTATCTTTTATGGGTTTCCTTCTTCTCCTCGATAGCCTATTCTTATACAGTAATCTGAAGCATCTGCTACAAACATGGCAACCATCAGTTTCGATATTCTTCTCTTTTGAGTACATGATACTGGCAACGACAACAGTGTCGATTTTTGTAAAATATCTTTTCTATGTTAGTGACATGCTCATGGAAGGACAATGGGAAAGGAAACCAGTCTTCACATTCTACTTGGAACTTATCAGGGACTTGCTTCACTTGTCTATGTATCTGTGCTTCTTCCTCGTAATTTTTGTAAACTATGGTGTTCCTTTGCACTTAATACGGGAGCTCTATGAGACATTTAGGAACTTCAAAGTCCGTGTTGCAGATTACATACGATATCGTAAGATCACTTCAAATATGAACGACCGATTTCCAGATGCAACACCTGAAGAGCTTAATGCAAGTGATGCAACTTGCATTATCTGTCGTGAAGAGATGACTACTGCAAAGAAACTTATATGTGGACATTTGTTTCATGTTCATTGCCTCCGATCATGGTTGGAGCGGCAACATACTTGCCCTACCTGCAGAGCCCTGGTTGTTCCCCCAGAAAATGGGGCAACAGCAACTGTAGGCCAGCAAGGAGCACATCCAGATGGTCATCGACAGGGAACAGGGACTACCACTGGAAGCACAGCTCAAAATGAGGTTGGCAGTGGTGGGGCAACTGATAATTTGAGTCAGCATCAAGCCCGACTTCAAGCTGCTGCCGCAGCAGCAGCTTCAATATATGAGAAGTCTTATGTTTATCCCTCTCCAACATCTTTAGTATGCTCTCCTGGGTACACTCTTCAACCCCCAGTTCAGATGTCTATGGGCGAATCTGTTAACATGGCACTCAATGGAGAACAAGCTTCTAGTGAACAGGCACAACAGCAATTTGTTCTCCCTGGTGGACCAATGATATCCTTTCCTCAAATGGGGCACTTCCATTTTCTTCCTTCCCAAACACGCGGAGCCCCTGCGAATTATGGAGTGGAGTTTGGAGTTGACCCAAATATGCCAAGCTCTCACCTGGAAGCTCATAGAAAACTACTTCAATATCAGATTGAGATTCTGCAAAATCAGCTCAAGCTTTTGCAGAGGACAAAGGTTGAAACAGGTGTAGATGAGGGTACATCTTCATCGTCCACATCGACAGCAGATAGCAGAGGCAAGCAAATAGCATCGAGTCATGAGATTCATCGTGAAAAAGAATAA 1659 0.4346 MMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQLTKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPMLSHVRIVSFMGFLLLLDSLFLYSNLKHLLQTWQPSVSIFFSFEYMILATTTVSIFVKYLFYVSDMLMEGQWERKPVFTFYLELIRDLLHLSMYLCFFLVIFVNYGVPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATATVGQQGAHPDGHRQGTGTTTGSTAQNEVGSGGATDNLSQHQARLQAAAAAAASIYEKSYVYPSPTSLVCSPGYTLQPPVQMSMGESVNMALNGEQASSEQAQQQFVLPGGPMISFPQMGHFHFLPSQTRGAPANYGVEFGVDPNMPSSHLEAHRKLLQYQIEILQNQLKLLQRTKVETGVDEGTSSSSTSTADSRGKQIASSHEIHREKE 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01564 552 SUPERFAMILY RING/U-box 272 336 - -
Arst1g01564 552 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Arst1g01564 552 MobiDBLite consensus disorder prediction 353 377 - -
Arst1g01564 552 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Arst1g01564 552 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 264 339 - -
Arst1g01564 552 MobiDBLite consensus disorder prediction 520 540 - -
Arst1g01564 552 Pfam Ring finger domain 291 330 IPR001841 -
Arst1g01564 552 PANTHER RING ZINC FINGER PROTEIN 1 530 - -
Arst1g01564 552 MobiDBLite consensus disorder prediction 520 552 - -
Arst1g01564 552 Coils Coil 496 516 - -
Arst1g01564 552 SMART ring_2 292 329 IPR001841 -
Arst1g01564 552 CDD RING-H2_synoviolin 289 330 - -
Arst1g01564 552 MobiDBLite consensus disorder prediction 340 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01564 Arst-Chr1 22490949 22495847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01564 1 546 C3H Transcription Factor Family AT3G16090 63.370 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01564 K10601 - gmx:100816441 842.802