Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01550 ATGAAGAGTATAGTGGAAAATGATGATGGCGGTGTTGAGCTTAATAATGAAAACAACTGGTTGGGGTTTTCACTCTCTCCACACCATCATGTTGATTCTTCTTCTTCCTCTTCTGCTGCTTCTGTTCCTCCAACAAGCTTCTACATGAACCACCATGCTTCTCATCTTAGCAGCTATGGATTCTACTACGGAATTGAACCTGACAACAATAATAGTAACGTTAGCCTGTATTCTGGTTTTCCAGTTATGCCCCATAAATCTGATGGCACCCTCTACGGAATGGAGCCTCTCATCAACAGGTCACACCCACAACAAGTGATTGGTTCAAGTTCAACGCCAAAACTGGAGAATTTGTTAGGTGGCGGCGATTTGATGGAGACACCTCATCATCACTATGAATGTAGTGTAGGTGTAGCGGAAGCAATGCCTCTCAGCCTGGACACCATTTTTCACAGAAACAACAACCACCAACCACACTTGTCATACTACCAGGGGCTTCTAGAAGGTTCCAACAAGCAAAGTACGCAAGCTTCAGACAATCTCAAGAACTGGGGGGTGATTGAGGTGAATAATAATGGAGGTGGTGAATTATTAGGAGCTTCTTCAATTGGAACAATGAGTTATGGGGGGGAGTTGCAGTCTTTGAGCTTGTCAATGAGTCCGAGCTCGCAATCGAGCTGCGTCACGAGTTCGCAGCAGCGTGTGAGTGTTGTTGGCAGCATGGATGCAACAAAGAAGAGGGGTTCTGAAAAGGTTCAACACAAGCATATTGTTCATAGAAAATCCATTGACACGTTTGGCCAAAGAACCTCACAGTATAGAGGTGTAACAAGGCATAGATGGACTGGTAGATATGAAGCACATCTATGGGACAATAGCTGCAAGAAAGAAGGCCAAAGTAGGAAAGGAAGGCAAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATATGGCGGCACTCAAGTACTGGGGACCCTCCACGCACATTAACTTCCCTTTGGAAAATTATCAAAATCAACTTGAGGAAATGAAGAACATGACCAGACAAGAATATGTTGCTCATTTAAGAAGAAAAAGCAGCGGATTCTCAAGGGGAGCTTCAATGTACAGAGGAGTAACTAGGCATCACCAACATGGAAGGTGGCAAGCTCGAATTGGAAGGGTAGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGCACACAAGAGGAAGCAGCAGAAGCTTATGACATTGCAGCCATAAAATTCAGAGGGGTTAATGCCGTAACAAACTTTGACATAACAAGATATGATGTCGAAAAAATCATGGCAAGCAACAACCTTCTAAGCAGTGAGCTAGCACGGCGGAACAAAGAGGTTCTCGTTGGCAGAGCCGGCAAGTTTAGTAACAACCTTGATAACCAAAGCCAAGAATCGATTCTAATGCAAATCAGCCAGAGCCAGCCAAGACTGGAGGCAATAGACAATGTGTTTTTTCAAGAAGTGGAGGATCCGAGCAAGATTTATGCGCATTTGCATAATGCGCATGCATCGGATCCTTCTTCGCTGGCAACGAGCTTGAACAGCTCAAGAGAAGGTAGCCCTGAAAACAGGACAAGCTTGCCAATGCTCTCTGCCGGAGGAGTAGCTTCTACCAAGCTATTGGCAGCCGCGGCAACTATTCCGGTGCTTTCTTTGCCTCAGATGCCCGTTTTTGCCGCTTGGACAGATGCTTAG 1725 0.4516 MKSIVENDDGGVELNNENNWLGFSLSPHHHVDSSSSSSAASVPPTSFYMNHHASHLSSYGFYYGIEPDNNNSNVSLYSGFPVMPHKSDGTLYGMEPLINRSHPQQVIGSSSTPKLENLLGGGDLMETPHHHYECSVGVAEAMPLSLDTIFHRNNNHQPHLSYYQGLLEGSNKQSTQASDNLKNWGVIEVNNNGGGELLGASSIGTMSYGGELQSLSLSMSPSSQSSCVTSSQQRVSVVGSMDATKKRGSEKVQHKHIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDMAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASNNLLSSELARRNKEVLVGRAGKFSNNLDNQSQESILMQISQSQPRLEAIDNVFFQEVEDPSKIYAHLHNAHASDPSSLATSLNSSREGSPENRTSLPMLSAGGVASTKLLAAAATIPVLSLPQMPVFAAWTDA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01550 574 FunFam AP2-like ethylene-responsive transcription factor 370 431 - -
Arst1g01550 574 MobiDBLite consensus disorder prediction 514 539 - -
Arst1g01550 574 PRINTS Ethylene responsive element binding protein signature 411 431 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 PRINTS Ethylene responsive element binding protein signature 273 284 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 ProSiteProfiles AP2/ERF domain profile. 371 429 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 SMART rav1_2 272 341 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 SMART rav1_2 371 435 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 SUPERFAMILY DNA-binding domain 271 337 IPR016177 GO:0003677
Arst1g01550 574 CDD AP2 271 335 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 ProSiteProfiles AP2/ERF domain profile. 272 335 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 Gene3D AP2/ERF domain 371 431 IPR036955 GO:0003700|GO:0006355
Arst1g01550 574 Gene3D AP2/ERF domain 271 337 IPR036955 GO:0003700|GO:0006355
Arst1g01550 574 SUPERFAMILY DNA-binding domain 370 430 IPR016177 GO:0003677
Arst1g01550 574 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 152 502 - -
Arst1g01550 574 FunFam AP2-like ethylene-responsive transcription factor ANT 271 337 - -
Arst1g01550 574 CDD AP2 370 431 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 Pfam AP2 domain 372 421 IPR001471 GO:0003700|GO:0006355
Arst1g01550 574 Pfam AP2 domain 272 327 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01550 Arst-Chr1 21327205 21332558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01550 1 574 AP2-EREBP Transcription Factor Family AT4G37750 48.309 1.22e-159 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst1g01550 AP2 7.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01550 K09285 - gmx:100792451 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00704 5 6117100 6120382 Arst1g01550 1 21327205 21332558 PCT