Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01526 ATGTCTGTCTCCCCAAAACACTCAGCTTGTACTCTTCTTGACTTGCACTGCAATGAAGCAACAAGCGATGTAGTGTACTTGGATTCCAACATTCACAGCAACTATGAATTCGACGATGCTGGTTCGAACAATGCTCTTCTATGGAGCGACTCTGGTAGTGTCGATGAAGAAGACCGTCTCTTGAGCTTGTTAGACTCTGAACTTGATCAAGTTCAGGAAAGAACAAGGTCTCTAATACAACTTCGCAAGACTAAGTGGTTGCGCAATGCGCGAGAAGAAGCCATAAATTGGATCCTAAAGGTATGTGCATACTACAGTTTTAGACCTGAGACGGCATATCTTTCTGCAATTTATCTTGATCGTTTCCTTTTGTCGCACACATTGAAGCAAGATAAAACATGGCCTCTGCAGCTGCTATCAGTTGCATGCCTTTCGCTTGCAGCGAAAATGGAAGAAACCAAGGTGCCTCTGCTATTGGACCTACAAATGGTTGAGCCAAGGTTCTTGTTTAAGCCGAAAACAGTTCAGAGGATGGAGCTTCTGGTTATGGCAACTCTCAAGTGGCAACTCCGAGTTATAACAAAGCCTTTCGATTTTGCTCATCTTTTCATTCTTAGACTTTCTTGTTCTTCAGCTTCCACATTAGGCGATTTAAATTATCTTGCTTCTCGTGTGTCTGATGTTATCTTTAAAACATGTTTAGTTATGGATTTCTTGGAGTTTTCACCTTCCACAATAGCAGCAGCGGCTCTGTTATATGTAACAGATCAATATGTTGATGACCTTAAACTATATGGCTTCCACAAGAATATAAGAATTGATATGGTGCAGAAATGTCACAACCTTATGAAGCAGACAATTCAGAGGTCGGAATATATTTTGCCCAAGACTACTCTTCAGTTAATGCCCCGAAGTCCAACTTGTGTGCTTGATCTTGCAGATATGCAAGATAATCATAGTGCTACTCACAAATGA 975 0.4113 MSVSPKHSACTLLDLHCNEATSDVVYLDSNIHSNYEFDDAGSNNALLWSDSGSVDEEDRLLSLLDSELDQVQERTRSLIQLRKTKWLRNAREEAINWILKVCAYYSFRPETAYLSAIYLDRFLLSHTLKQDKTWPLQLLSVACLSLAAKMEETKVPLLLDLQMVEPRFLFKPKTVQRMELLVMATLKWQLRVITKPFDFAHLFILRLSCSSASTLGDLNYLASRVSDVIFKTCLVMDFLEFSPSTIAAAALLYVTDQYVDDLKLYGFHKNIRIDMVQKCHNLMKQTIQRSEYILPKTTLQLMPRSPTCVLDLADMQDNHSATHK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01526 324 Pfam Cyclin, N-terminal domain 75 190 IPR006671 -
Arst1g01526 324 SMART cyclin_7 96 184 IPR013763 -
Arst1g01526 324 CDD CYCLIN_AtCycD-like_rpt1 90 188 - -
Arst1g01526 324 PANTHER CYCLINS 80 289 IPR039361 -
Arst1g01526 324 SUPERFAMILY Cyclin-like 175 284 IPR036915 -
Arst1g01526 324 CDD CYCLIN_AtCycD-like_rpt2 196 283 - -
Arst1g01526 324 SUPERFAMILY Cyclin-like 57 190 IPR036915 -
Arst1g01526 324 Gene3D - 75 191 - -
Arst1g01526 324 Gene3D - 192 258 - -
Arst1g01526 324 FunFam D6-type cyclin 74 191 - -
Arst1g01526 324 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01526 Arst-Chr1 20185575 20187672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01526 13 301 Core Cell Cycle Gene Families AT1G70210 36.789 6.03e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01526 K18810 - gmx:100799323 381.333