Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01509 ATGGATACGCTGTTTAGGCTAGATCCACCGTCCCTAAACTCCACAACAACATCATCAGCCAACTCTCATCAAAATTATTATTATTATTATGACCAACACCAACTAGAGGAAGAAGCTGAAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTATCCTCTTCTTCTTCAAAGCAACAAGAACAATATTACCCTTATTATAACCAATTACAACCCCACTACCATTTATTATCATCCACTACCACTACTCATCATGATTTATCGTCAACATCATTCTTACCACCCACTCCACCACCATCAGATTTCAACTTTGAATTCTCATCAGGCTCGTGGGCACCCAACATCCTCCTCGACACCGCACGTGCCATCGCTGACAACAACACCACGCGACTGCATCAACTCCTATGGATGCTCAACGAGCTAAGCTCTCCATACGGCGACACAAACCAAAAACTCGCCGCGTATTTTCTTCAAGCCTTGTTCAGCCGCATAACCACCGTCGGCGAACGAACCTACCGAACCTTAACGTTAGCTTCGGACAAGACTTGCTGTTTCGAGTCCACCAGAAAGACGGTTCTCAAGTTCCAGGAGGTTAGTCCCTGGACCACGTTTGGACACGTGGCGTCCAATGGCGCCATCTTAGAGGCTCTCGATGGGGAGCTCAACTTGCACATTGTGGATTTCAGCAACACGTACTGCACACAGTGGCCAACGCTTCTTGAAGCCTTGGCCACTCGTAGCGACGACACCCCGAACCTCCGCTTAACCACCGTCGTCACCACCAGACCTGGTGACTCTGGCGACGCTGTTCAGAGGGTCATGAAGGAAATAGGTACAAGGATGGAGAAATTTGCGAGGCTAATGGGAGTTCCGTTCAAATTCAACGTCGTTTGCCACGTCGGCGATCTCTCCAATCTCAACTTCGGCGATTTGGACATCAAGAACGAGGAGGCCTTAGCCATCAACTGCGTGAACACGCTCCACGCGATCACACCCGTCGGGAACCACCGTGACACGTTGATATCATCGCTGGCGAGGCTAAACCCTCGGATCGTGACGGTGGTGGAAGAAGAAGCGGATCTGGACGTTGGCGTCGAAGGCCAGGAGTTCCTTAAAGGGTTCGAGGAATGCGTGAAGTGGTTTAGGGTTTACATGGAGGCGCTGGATGAGAGCTTTACAAGGACGAGTGGGGAGAGGCTGATGCTGGAAAGGGCGGCGGGGAGGGCGATTGTGGACCTGGTGGCGTGTACGGCGGCGGAATCGGTGGAGCGGAGGGAGACGGCCGTGAAATGGTCGCAGAAAATGAGGGAAGGTGGAAGGTTGAATAGGATGCCGTTTAGCGAGGAGGTGTGTGATGACGTCAGAGCATTGTTGAGAAGGTATAGGGAAGGGTGGTCGATGGCACAGTGTTCCGATAACGGAGTATTTCTTTGTTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAAGCCGTAG 1482 0.5135 MDTLFRLDPPSLNSTTTSSANSHQNYYYYYDQHQLEEEAEEECFNFFMDEEDLSSSSSKQQEQYYPYYNQLQPHYHLLSSTTTTHHDLSSTSFLPPTPPPSDFNFEFSSGSWAPNILLDTARAIADNNTTRLHQLLWMLNELSSPYGDTNQKLAAYFLQALFSRITTVGERTYRTLTLASDKTCCFESTRKTVLKFQEVSPWTTFGHVASNGAILEALDGELNLHIVDFSNTYCTQWPTLLEALATRSDDTPNLRLTTVVTTRPGDSGDAVQRVMKEIGTRMEKFARLMGVPFKFNVVCHVGDLSNLNFGDLDIKNEEALAINCVNTLHAITPVGNHRDTLISSLARLNPRIVTVVEEEADLDVGVEGQEFLKGFEECVKWFRVYMEALDESFTRTSGERLMLERAAGRAIVDLVACTAAESVERRETAVKWSQKMREGGRLNRMPFSEEVCDDVRALLRRYREGWSMAQCSDNGVFLCWKDQPVVWASAWKP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01509 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 485 IPR005202 -
Arst1g01509 493 ProSiteProfiles GRAS family profile. 104 492 IPR005202 -
Arst1g01509 493 Pfam GRAS domain family 116 492 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01509 Arst-Chr1 19813192 19815536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01509 26 493 GRAS Transcription Factor Family AT4G37650 60.040 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst1g01509 GRAS 2.2e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01509 - - gmx:100778524 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01509 1 19813192 19815536 Arst1g01509 1 19813192 19815536 ECH
Arst5g00740 5 6365011 6367222 Arst1g01509 1 19813192 19815536 PCT