Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01494 ATGGAGAATTATTTAAATGAGAATTTTGGAGGTGTGAAATCCAAGAACTCTGATGGAGAATCTCTTGGTAAATGGAGAAAACTATGTGGGGTGGTCAAGAACCCCAAAAGACGCTTTCGTTTCACTGCCAATCTCTCTAAGCGAGAAGAAGCAGCAGCTATGCGTCGCACTAATCAGGAAAAGCTGAGAGTTGCTGTTTTAGTTTCCAAAGCTGCATTTCAATTTATCCAAGGTGTGCAACTTGGTGATTACACTGTACCACAGCATGTTAAAGCTGCAGGATTTCAAATAGATGCAGAGGAACTTGGGTCTATAGTTGAAGGACATGACGTAAAGAAGTTGAAATTCCATGGTGGGGTTGAAGGCATTGCAGAAAAGCTTTCAACATCAACAGCCAAGGGTCTTAGTGACGGTTTCGAATCGCAGCGTAGGAGAGAGGAGATTTTCGGAGTGAACCAATTCGCTGAAGCTGAACTTCGGAGCTTCTGGGTTTACGTTTTCGAAGCCCTTCATGACATGACACTCATGATTCTTGGAGTGTGTGCCTTTGTGTCGCTGATAGTTGGAATAGCAACAGAAGGATGGCCAAAGGGTGCTCACGACGGTCTCGGGATAGTCGTGAGCATCTTATTGGTGGTCTTTGTAACCGCCACAAGTGACTACCGCCAATCCTTACAGTTCAAAGATTTAGACAAGGAGAAAAAAAAGATTTCAGTTCAGATAACAAGAAACGGTTACAGGCAGAAAATGTCAATTTACAGTTTACTCCCTGGGGACATGGTCCATCTTGCCATTGGAGACCAAGTCCCTGCCGACGGACTCTTCGTTTCAGGATTCTCCGTCTTGATTGACGAGTCGAGTTTAACCGGCGAGAGCGAACCGGTTATGGTTACTTCTCAGAACCCGTTTCTTCTTTCGGGAACCAAAGTCCAAGATGGATCCTGCACCATGATGGTTACAACGGTGGGAATGAGAACACAGTGGGGGAAGTTAATGGCGACGCTAAGCGAAGGTGGCGATGACGAGACGCCGTTGCAGGTGAAGCTGAATGGAGTGGCAACGATTATAGGAAAGATAGGACTGTTTTTCGCGGTGATTACTTTCGTTGTGTTGGTGAAGGGACTAATGGGGAGAAAACTTGAAGAAGGGAGGTTTTGGTGGTGGTCTACGGAGGATTGCTTGGAGATGCTGGAATTCTTCGCCATTGCAGTTACGATTGTTGTTGTTGCTGTGCCGGAGGGGCTGCCGTTGGCAGTTACGTTGAGCCTTGCGTTTGCGATGAAGAAGATGATGAATGACAAGGCTCTTGTGAGACACCTGGCAGCTTGCGAGACCATGGGATCCGCCACAACTATTTGTAGTGACAAGACTGGAACCCTAACAACTAACCGCATGACAGTTGTCAAAACATGCATTTGTATGAAGGTTAATGAAGTGAGCAACAATAAGGTGTCGCAACTCCCAGATTTGGCATTAAAGCTGCTACTTGAGTCAATATTCAACAACACCGGCGGTGAAGTTGTGGTTAACAAAATGGGGAAGCGTGAGATTTTGGGAACTCCAACAGAATCAGCGATTCTAGAATTCGGGCTCTCGCTAGGTGGGGACCCACAAGGCGAGAGAGAAAAATGCAAGCTTATAAAAGTTGAGCCATTCAACTCCGAAAAGAAAAGAATGGGCGTGGTTGTGAAGGTCCAAGATGGAGGAGGCTTAAGAGCACATAGCAAAGGTGCTTCTGAAATAGTGCTTGCATCTTGTGACAAAGTGATAAACTCAAATGGTGAGATTGTGTCCCTTGATGAAGAAGCAATGAACCATCTTAGCAAGACAATAAACCAGTTTGCTGGTGAGGCACTTAGGACTCTGTGCCTTGCTTATATGGAATTGGAAAATGGGTTCTCTCCAGAGGATCCTATTCCTTCTTCTGGATACACTTGTATAGGAGTTGTTGGTATCAAAGATCCCGTTCGTCCGGGTGTTAAGGAATCTGTTGCAGTGTGTCGGTCCGCCGGAATAGTAGTGAGGATGGTCACCGGAGATAACATTAATACGGCAAAGGCTATTGCCAGAGAGTGTGGAATTTTAACAGATGATGGCATAGCCATTGAAGGTCCTGAATTTAGACAAAAAACTCAGGAGGAATTGTTTGAACTCATTCCCAAACTTCAGGTGATGGCTAGATCCTCACCTTTAGATAAGCATACATTGGTGAAGCAGTTGCGCACAACTTTTGGAGAGGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCCCCAGCCCTTCATGAAGCTGATATTGGACTTGCAATGGGAATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATAATTTTAGACGATAACTTCTCCACAATAGTGACAGTAGCAAAATGGGGACGTTCAGTTTACATAAATATTCAAAAATTTGTACAGTTTCAGCTTACCGTTAATGTGGTAGCATTACTAGTGAACTTCTCATCAGCTTGTTTCACAGGAAATGCACCACTGACGGCGGTTCAACTTTTGTGGGTGAACATGATAATGGACACACTAGGAGCACTTGCACTTGCAACGGAGCCTCCAAATGATGATTTGATGAAGCGTGCACCTGTTGGAAGGAAAGGAGATTTCATCAGCAATATCATGTGGAGAAATATCTTGGGACAATCAGTGTATCAAGTTGTTGTCATTTGGCTTCTTCAGACTGTGGGAAGATGGTTCTTCTTTCTCTGGGGCCCAAATCCTGATGTTGTCTTAAACACTCTTATTTTCAACACATTTGTCTTCTGTCAGGTTTTCAATGAGATAAACTCTCGAGAAATGGAGGAAGTAGATGTGTTAAAGGGCATGTGGGAAAATCAGGTGTTTGTGGCTGTGATTAGTTGCACTGTGGTGTTTCAAATCATAATAGTTGAGTACTTGGGAACCTTTGCAAACACAACACCTCTCTCTTTTGTACAATGGCTCTTTTGTTTAGGGGTTGGGTATATGGGCATGCCAATCGCAGCAAAGTTAAAAGAGATCAATGTTGAATGA 3042 0.4428 MENYLNENFGGVKSKNSDGESLGKWRKLCGVVKNPKRRFRFTANLSKREEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQLGDYTVPQHVKAAGFQIDAEELGSIVEGHDVKKLKFHGGVEGIAEKLSTSTAKGLSDGFESQRRREEIFGVNQFAEAELRSFWVYVFEALHDMTLMILGVCAFVSLIVGIATEGWPKGAHDGLGIVVSILLVVFVTATSDYRQSLQFKDLDKEKKKISVQITRNGYRQKMSIYSLLPGDMVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVTSQNPFLLSGTKVQDGSCTMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFVVLVKGLMGRKLEEGRFWWWSTEDCLEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMKVNEVSNNKVSQLPDLALKLLLESIFNNTGGEVVVNKMGKREILGTPTESAILEFGLSLGGDPQGEREKCKLIKVEPFNSEKKRMGVVVKVQDGGGLRAHSKGASEIVLASCDKVINSNGEIVSLDEEAMNHLSKTINQFAGEALRTLCLAYMELENGFSPEDPIPSSGYTCIGVVGIKDPVRPGVKESVAVCRSAGIVVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFRQKTQEELFELIPKLQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACFTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRAPVGRKGDFISNIMWRNILGQSVYQVVVIWLLQTVGRWFFFLWGPNPDVVLNTLIFNTFVFCQVFNEINSREMEEVDVLKGMWENQVFVAVISCTVVFQIIIVEYLGTFANTTPLSFVQWLFCLGVGYMGMPIAAKLKEINVE 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01494 1013 FunFam Calcium-transporting ATPase 463 655 - -
Arst1g01494 1013 Gene3D - 168 999 - -
Arst1g01494 1013 CDD P-type_ATPase_Ca_PMCA-like 144 884 - -
Arst1g01494 1013 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Arst1g01494 1013 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1008 IPR023298 -
Arst1g01494 1013 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 660 IPR023299 GO:0000166
Arst1g01494 1013 FunFam Calcium-transporting ATPase 216 336 - -
Arst1g01494 1013 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Arst1g01494 1013 FunFam Calcium-transporting ATPase 17 77 - -
Arst1g01494 1013 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Arst1g01494 1013 NCBIfam HAD-IC family P-type ATPase 386 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01494 1013 NCBIfam HAD-IC family P-type ATPase 545 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01494 1013 NCBIfam HAD-IC family P-type ATPase 721 833 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01494 1013 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Arst1g01494 1013 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Arst1g01494 1013 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Arst1g01494 1013 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Arst1g01494 1013 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Arst1g01494 1013 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Arst1g01494 1013 Pfam Cation transport ATPase (P-type) 511 589 - -
Arst1g01494 1013 SUPERFAMILY HAD-like 451 856 IPR036412 -
Arst1g01494 1013 Gene3D - 18 77 - -
Arst1g01494 1013 Gene3D - 463 655 IPR023299 GO:0000166
Arst1g01494 1013 Pfam Cation transporting ATPase, C-terminus 836 1004 IPR006068 -
Arst1g01494 1013 NCBIfam calcium-translocating P-type ATPase, PMCA-type 109 1012 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst1g01494 1013 NCBIfam calcium-translocating P-type ATPase, PMCA-type 109 1012 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst1g01494 1013 SMART Cation_ATPase_N_a_2 114 190 IPR004014 -
Arst1g01494 1013 Gene3D - 141 336 - -
Arst1g01494 1013 FunFam Calcium-transporting ATPase 768 1013 - -
Arst1g01494 1013 Pfam E1-E2 ATPase 236 431 - -
Arst1g01494 1013 SFLD p-type atpase 435 803 IPR044492 -
Arst1g01494 1013 SFLD p-type atpase 435 803 IPR044492 -
Arst1g01494 1013 FunFam Calcium-transporting ATPase 644 796 - -
Arst1g01494 1013 Gene3D - 450 796 IPR023214 -
Arst1g01494 1013 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01494 1013 PRINTS H+-transporting ATPase (proton pump) signature 607 625 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01494 1013 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01494 1013 SFLD C1.7: P-type atpase like 435 803 - -
Arst1g01494 1013 SFLD C1.7: P-type atpase like 435 803 - -
Arst1g01494 1013 PANTHER CATION TRANSPORTING ATPASE 59 1011 - -
Arst1g01494 1013 PANTHER CATION TRANSPORTING ATPASE 59 1011 - -
Arst1g01494 1013 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01494 Arst-Chr1 19567831 19574477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01494 1 1012 Primary Pumps ATPases AT4G37640 79.409 0.0 1646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01494 K01537 - gmx:100776926 1737.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01494 1 19567831 19574477 Arst1g01494 1 19567831 19574477 ECH
Arst5g00750 5 6416296 6420825 Arst1g01494 1 19567831 19574477 PCT