Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01493 ATGGAGAATTATTTAAATGAGAATTTTGGAGGTGTGAAATCCAAGAACTCTGATGGAGAATCTCTTGGTAAATGGAGAAAACTATGTGGGGTGGTCAAGAACCCCAAAAGACGCTTTCGTTTCACTGCCAATCTCTCTAAGCGAGAAGAAGCAGCAGCTATGCGTCGCACTAATCAGGAAAAGCTGAGAGTTGCTGTTTTAGTTTCCAAAGCTGCATTTCAATTTATCCAAGGTGTGCAACTTGGTGATTACACTGTACCACAGCATGTTAAAGCTGCAGGATTTCAAATAGATGCAGAGGAACTTGGGTCTATAGTTGAAGGACATGACGTAAAGAAGTTGAAATTCCATGGTGGGGTTGAAGGCATTGCAGAAAAGCTTTCAACATCAACAGCCAAGGGTCTTAGTGACGGTTTCGAATCGCAGCGTAGGAGAGAGGAGATTTTCGGAGTGAACCAATTCGCTGAAGCTGAACTTCGGAGCTTCTGGGTTTACGTTTTCGAAGCCCTTCATGACATGACACTCATGATTCTTGGAGTGTGTGCCTTTGTGTCGCTGATAGTTGGAATAGCAACAGAAGGATGGCCAAAGGGTGCTCACGACGGTCTCGGGATAGTCGTGAGCATCTTATTGGTGGTCTTTGTAACCGCCACAAGTGACTACCGCCAATCCTTACAGTTCAAAGATTTAGACAAGGAGAAAAAAAAGATTTCAGTTCAGATAACAAGAAACGGTTACAGGCAGAAAATGTCAATTTACAGTTTACTCCCTGGGGACATGGTCCATCTTGCCATTGGAGACCAAGTCCCTGCCGACGGACTCTTCGTTTCAGGATTCTCCGTCTTGATTGACGAGTCGAGTTTAACCGGCGAGAGCGAACCGGTTATGGTTACTTCTCAGAACCCGTTTCTTCTTTCGGGAACCAAAGTCCAAGATGGATCCTGCACCATGATGGTTACAACGGTGGGAATGAGAACACAGTGGGGGAAGTTAATGGCGACGCTAAGCGAAGGTGGCGATGACGAGACGCCGTTGCAGGTGAAGCTGAATGGAGTGGCAACGATTATAGGAAAGATAGGACTGTTTTTCGCGGTGATTACTTTCGTTGTGTTGGTGAAGGGACTAATGGGGAGAAAACTTGAAGAAGGGAGGTTTTGGTGGTGGTCTACGGAGGATTGCTTGGAGATGCTGGAATTCTTCGCCATTGCAGTTACGATTGTTGTTGTTGCTGTGCCGGAGGGGCTGCCGTTGGCAGTTACGTTGAGCCTTGCGTTTGCGATGAAGAAGATGATGAATGACAAGGCTCTTGTGAGACACCTGGCAGCTTGCGAGACCATGGGATCCGCCACAACTATTTGTAGTGACAAGACTGGAACCCTAACAACTAACCGCATGACAGTTGTCAAAACATGCATTTGTATGAAGGTTAATGAAGTGAGCAACAATAAGGTGTCGCAACTCCCAGATTTGGCATTAAAGCTGCTACTTGAGTCAATATTCAACAACACCGGCGGTGAAGTTGTGGTTAACAAAATGGGGAAGCGTGAGATTTTGGGAACTCCAACAGAATCAGCGATTCTAGAATTCGGGCTCTCGCTAGGTGGGGACCCACAAGGCGAGAGAGAAAAATGCAAGCTTATAAAAGTTGAGCCATTCAACTCCGAAAAGAAAAGAATGGGCGTGGTTGTGAAGGTCCAAGATGGAGGAGGCTTAAGAGCACATAGCAAAGGTGCTTCTGAAATAGTGCTTGCATCTTGTGACAAAGTGATAAACTCAAATGGTGAGATTGTGTCCCTTGATGAAGAAGCAATGAACCATCTTAGCAAGACAATAAACCAGTTTGCTGGTGAGGCACTTAGGACTCTGTGCCTTGCTTATATGGAATTAGGTCCTGAATTTAGACAAAAAACTCAGGAGGAATTGTTTGAACTCATTCCCAAACTTCAGGTGATGGCTAGATCCTCACCTTTAGATAAGCATACATTGGTGAAGCAGTTGCGCACAACTTTTGGAGAGGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCCCCAGCCCTTCATGAAGCTGATATTGGACTTGCAATGGGAATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATAATTTTAGACGATAACTTCTCCACAATAGTGACAGTAGCAAAATGGGGACGTTCAGTTTACATAAATATTCAAAAATTTGTACAGTTTCAGCTTACCGTTAATGTGGTAGCATTACTAGTGAACTTCTCATCAGCTTGTTTCACAGGAAATGCACCACTGACGGCGGTTCAACTTTTGTGGGTGAACATGATAATGGACACACTAGGAGCACTTGCACTTGCAACGGAGCCTCCAAATGATGATTTGATGAAGCGTGCACCTGTTGGAAGGAAAGGAGATTTCATCAGCAATATCATGTGGAGAAATATCTTGGGACAATCAGTGTATCAAGTTGTTGTCATTTGGCTTCTTCAGACTGTGGGAAGATGGTTCTTCTTTCTCTGGGGCCCAAATCCTGATGTTGTCTTAAACACTCTTATTTTCAACACATTTGTCTTCTGTCAGGTTTTCAATGAGATAAACTCTCGAGAAATGGAGGAAGTAGATGTGTTAAAGGGCATGTGGGAAAATCAGGTGTTTGTGGCTGTGATTAGTTGCACTGTGGTGTTTCAAATCATAATAGTTGAGTACTTGGGAACCTTTGCAAACACAACACCTCTCTCTTTTGTACAATGGCTCTTTTGTTTAGGGGTTGGGTATATGGGCATGCCAATCGCAGCAAAGTTAAAAGAGATCAATGTTGAATGA 2820 0.4415 MENYLNENFGGVKSKNSDGESLGKWRKLCGVVKNPKRRFRFTANLSKREEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQLGDYTVPQHVKAAGFQIDAEELGSIVEGHDVKKLKFHGGVEGIAEKLSTSTAKGLSDGFESQRRREEIFGVNQFAEAELRSFWVYVFEALHDMTLMILGVCAFVSLIVGIATEGWPKGAHDGLGIVVSILLVVFVTATSDYRQSLQFKDLDKEKKKISVQITRNGYRQKMSIYSLLPGDMVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVTSQNPFLLSGTKVQDGSCTMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFVVLVKGLMGRKLEEGRFWWWSTEDCLEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMKVNEVSNNKVSQLPDLALKLLLESIFNNTGGEVVVNKMGKREILGTPTESAILEFGLSLGGDPQGEREKCKLIKVEPFNSEKKRMGVVVKVQDGGGLRAHSKGASEIVLASCDKVINSNGEIVSLDEEAMNHLSKTINQFAGEALRTLCLAYMELGPEFRQKTQEELFELIPKLQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACFTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRAPVGRKGDFISNIMWRNILGQSVYQVVVIWLLQTVGRWFFFLWGPNPDVVLNTLIFNTFVFCQVFNEINSREMEEVDVLKGMWENQVFVAVISCTVVFQIIIVEYLGTFANTTPLSFVQWLFCLGVGYMGMPIAAKLKEINVE 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01493 939 PRINTS P-type cation-transporting ATPase superfamily signature 677 696 - -
Arst1g01493 939 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Arst1g01493 939 PRINTS P-type cation-transporting ATPase superfamily signature 701 713 - -
Arst1g01493 939 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Arst1g01493 939 Pfam Cation transporting ATPase, C-terminus 762 930 IPR006068 -
Arst1g01493 939 PRINTS Sodium/potassium-transporting ATPase signature 446 467 - -
Arst1g01493 939 PRINTS Sodium/potassium-transporting ATPase signature 203 223 - -
Arst1g01493 939 PRINTS Sodium/potassium-transporting ATPase signature 573 591 - -
Arst1g01493 939 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Arst1g01493 939 FunFam Calcium-transporting ATPase 17 77 - -
Arst1g01493 939 Gene3D - 18 77 - -
Arst1g01493 939 Gene3D - 450 462 IPR023214 -
Arst1g01493 939 NCBIfam calcium-translocating P-type ATPase, PMCA-type 109 632 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst1g01493 939 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Arst1g01493 939 Gene3D - 168 449 - -
Arst1g01493 939 Gene3D - 689 938 - -
Arst1g01493 939 FunFam Calcium-transporting ATPase 694 939 - -
Arst1g01493 939 PANTHER CATION TRANSPORTING ATPASE 59 628 - -
Arst1g01493 939 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 934 IPR023298 -
Arst1g01493 939 PANTHER CATION TRANSPORTING ATPASE 59 628 - -
Arst1g01493 939 FunFam Calcium-transporting ATPase 216 336 - -
Arst1g01493 939 Pfam E1-E2 ATPase 236 431 - -
Arst1g01493 939 SUPERFAMILY HAD-like 441 721 IPR036412 -
Arst1g01493 939 SMART Cation_ATPase_N_a_2 114 190 IPR004014 -
Arst1g01493 939 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 633 IPR023299 GO:0000166
Arst1g01493 939 Pfam Cation transport ATPase (P-type) 511 589 - -
Arst1g01493 939 Gene3D - 141 336 - -
Arst1g01493 939 Gene3D - 463 635 IPR023299 GO:0000166
Arst1g01493 939 NCBIfam HAD-IC family P-type ATPase 386 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01493 939 NCBIfam HAD-IC family P-type ATPase 647 759 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01493 939 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Arst1g01493 939 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01493 Arst-Chr1 19567831 19574477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01493 630 938 Primary Pumps ATPases AT4G37640 80.583 9.31e-171 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01493 K01537 - gmx:100815662 1055.82