Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01486 ATGTCTTCTTGTAGCAGAACGATCCCTGGACTGGATGCTTCTGGGGAAGAGAATTTTGATGGATTCGGCGATACCGGAGATATCGATGCAACGGAATCACTACTGGACATTGGGATGGAAACAGAGGAAGAAGAGTTGGGGGAAGAATCACCCAATGAAGAGGACGGTGAACAGAACGGCAGTGCTGAACATGTAGTGTTTGGTCGTGCACAGATATTGGAGATGGAGTTCGCAAACCCGGATGAGGCGTGTCGTTTTTATGAGCAATATAGTCGAGCAAAGGGTTTTGCGATGCGTCAAGGAAAGAAACTAAAGAATAGGAAGGGTGAAATCGTGCGATACACGTATTTGTGCAACAGAGAAGGATTCAGAGATAGAAAATGGCTTGAGATGCAGGATCGAAAGAGGGAGCACAAGGTTGTTACTCGATGTGGATGTCAGGCAGAGATGAGGATAAAGCAAAAAGCCGAGAGCAACAATTGGTATGTGTCTCGTTTTGTTGATGAGCATAACCACGACCTTCTCCCGGCAAAGTTTGTGTCATACCTGCCAGCATATAGGAAAATATCCGATGTTGATAGAGCCCACATGGAGAGTTTGAGGCAGGTTGGGGCTGAGCAAAATATGTGTGATCTGTTTTGGAGCGACGGGCGTAGTCAGGATGATTATAAGTTATTTGGTGATGTTTTGGCATTTGATGCGACTTACGGGCGAAACAAGTACAATTTGCCAGTGATAGTGTTCTCCGGGGTGAACCACCATAACCAAACATGTGTCTTTGGCGCAGCCATGGTGTCTTCTGAAACACAAGCATCGTATGAAGTGTTTCCAGAAGCTCATCACAGGCTCTGTGCGTGGCACCTACTAAAAAATGCAACTGTGAATGTGTGCAAGCCTCGATTCACAACTCTGCTTAGAAATTGCATGCTTGCCGACGTGGAGGTGGAGAAGTTTGAAAGGCAATGGGAGGCAATGATGGATGAGTGTCTTGTTAGGGAAGTAGAGTGGGTAAAGGATTTATACACGAAGAAGATGGCATGGGCTACCGCTTACATACGCGGTTGCTTTTATGCTGGCTTGAGGACGACATCACGATGTGAGTCACTGCATGCAAAGATGGGGAGGTTTGTGGAGAGGCGATATGGAATATTGGATTTCGTGACGAACTTCCAACGGTGTGTTGAATTCTTGAGAGATAATGAGGAAGAGCTTGACTTTAGGTCGTTGTACGGGAGCCCGGTTCTTCAAACTCAGTTTCCGGAGCTAGAGAAGTCTGGTGCAGTGAACTACACGAGGGAAATATTCTTGCGTTTTAGAGAGGCCCTAAAAAGTAGTGTTCGGGTTACTATCGTGGAGTGCAAGAAATTGGAGGATCGGACAGTTTATGTGACACAAAAGTATCGCAGGCCGCAATCCAGGTGGACTGTTGCCCACCACTTTGGGACGGATTCCTTTTTTTGTAGTTGTATGAGGATGGAGTCGTTCGGACTACCTTGCGTTCACATACTTGCAGTGTTGGTCCAGTTAGACATAGGTTATCTTCCAAAAAGCCTGGTGTTGCAACGGTGGTCGAAGACAGCCAAAGTTGAGATCGAGGGCCCTTCCATCATGAATGAACCGGGTGAAGCGAATGAGGTATATAGGAGCCGCATGGGTGCTTTCCTGCAGCATTGTAAGCGGTTGGCAAGAGTTGCGTGTATGCGAGAGAGTGATTTCAAGAGCTGCTTGGATAGGATAGTTGAGGAAACTTATGTGTTAGAGATGAAGAATGGTGTTGGGACCGCTGCCCAAGGGACTGCCGCCGGTGGCCAAGATGGAGTGCGTGATCCTGTTGCAGTTCGGACTAAGGGAACAGGGCGTGCGCAAGAGCCTTTTGGTTGTAGGGGCATAAAGAGGCGTAAGTGCAGCAACTGTGGAGTAGTGGGCCATCGTCGAACCCGTTGCCCGAGTGGTCCATGTAGCCAGCCGGTGTGTACCCAGGACCTCGCTGAAGGTGCTTTAGGGCGGGATGATTCACAGAGCCATGGCACGGTGTCCGGCAACGACAAGCAAAGTAAGAGTCGAAGGAGGACCGTGCATGTAACTTCAACCCCTTTGCACGATGCATGA 2109 0.4846 MSSCSRTIPGLDASGEENFDGFGDTGDIDATESLLDIGMETEEEELGEESPNEEDGEQNGSAEHVVFGRAQILEMEFANPDEACRFYEQYSRAKGFAMRQGKKLKNRKGEIVRYTYLCNREGFRDRKWLEMQDRKREHKVVTRCGCQAEMRIKQKAESNNWYVSRFVDEHNHDLLPAKFVSYLPAYRKISDVDRAHMESLRQVGAEQNMCDLFWSDGRSQDDYKLFGDVLAFDATYGRNKYNLPVIVFSGVNHHNQTCVFGAAMVSSETQASYEVFPEAHHRLCAWHLLKNATVNVCKPRFTTLLRNCMLADVEVEKFERQWEAMMDECLVREVEWVKDLYTKKMAWATAYIRGCFYAGLRTTSRCESLHAKMGRFVERRYGILDFVTNFQRCVEFLRDNEEELDFRSLYGSPVLQTQFPELEKSGAVNYTREIFLRFREALKSSVRVTIVECKKLEDRTVYVTQKYRRPQSRWTVAHHFGTDSFFCSCMRMESFGLPCVHILAVLVQLDIGYLPKSLVLQRWSKTAKVEIEGPSIMNEPGEANEVYRSRMGAFLQHCKRLARVACMRESDFKSCLDRIVEETYVLEMKNGVGTAAQGTAAGGQDGVRDPVAVRTKGTGRAQEPFGCRGIKRRKCSNCGVVGHRRTRCPSGPCSQPVCTQDLAEGALGRDDSQSHGTVSGNDKQSKSRRRTVHVTSTPLHDA 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01486 702 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 560 IPR031052 GO:0006355
Arst1g01486 702 MobiDBLite consensus disorder prediction 1 26 - -
Arst1g01486 702 MobiDBLite consensus disorder prediction 668 702 - -
Arst1g01486 702 ProSiteProfiles Zinc finger CCHC-type profile. 633 650 IPR001878 GO:0003676|GO:0008270
Arst1g01486 702 Pfam MULE transposase domain 229 276 IPR018289 -
Arst1g01486 702 Pfam SWIM zinc finger 486 506 IPR007527 GO:0008270
Arst1g01486 702 ProSiteProfiles Zinc finger SWIM-type profile. 474 510 IPR007527 GO:0008270
Arst1g01486 702 MobiDBLite consensus disorder prediction 682 702 - -
Arst1g01486 702 SMART 26again6 485 512 IPR006564 GO:0008270
Arst1g01486 702 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01486 Arst-Chr1 19308369 19312022 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst1g01486 FAR1 1.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01486 - - adu:110274973 1424.84