Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01477 CCTCCGCCAGCACTCGCCGCCGCCGAAACCCTGGCACAAAAGATTGGCAAGTCGACGCGCCGGCCCGGCGCGTCGTCCAAGGCAAGGGTTTACGCCGACGTCAACGTCGTTCGCCCTAAAGAATATTGGGACTACGAGACCCTCAACGTCCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTGTTTGAGGGTGTTCACTGCACCGATAACGAAAAATGCGTCATAAAGATCCTGAAGCCTGTGAAGAAGAAGAAGATCAAGAGGGAAATCAAAATTTTACAGAATCTTTGTGGGGGGCCCAATATTGTAAAGTTGCTCGACATTGTTAGAGACCAGCAGTCAAAGACCCCAAGCCTTATATTTGAATATGTTAATAACACTGATTTTAAAGTGCTTTATCCCACATTGTCAGACTATGATATAAGATATTACATCTATGAACTTTTAAAGGCACTAGATTACTGCCACTCTCAAGGAATTATGCATCGGGATGTAAAGCCACATAATGTGATGATTGACCATGAGCAGCGAAAACTTAGGCTTATAGATTGGGGGCTTGCAGAGTTTTATCATCCTGGGAAAGAATATAATGTTCGCGTTGCGTCCAGATATTTCAAAGGCCCCGAGCTTCTTGTTGATCTTCAAGACTACGATTATTCTCTTGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATATTCCGGAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATAGCGAAGGTACTCGGTACAGATGAATTAAGTGCATATTTAAATAAGTATCGCATAGAGTTGGACCCACATCTTGCAGCGCTTGTTGGGAGGCATAGCCGAAAGCCATGGACAAAGTTCATTATACGGTATGATCACCAAGAACGTCCAACTGCAAAAGAAGCCATGGCCCATCCTTACTTCAACCCAGTCAGAAATGCCGAAAGTAGTAGAAATCGAACAGATTGA 1017 0.4425 SLSRDALLSLFRTPPSLRYPNLPRALPLLFFLTRFTSRAAASTFRRPPPALAAAETLAQKIGKSTRRPGASSKARVYADVNVVRPKEYWDYETLNVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLNKYRIELDPHLAALVGRHSRKPWTKFINXRYDHQERPTAKEAMAHPYFNPVRNAESSRNRTD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01477 385 FunFam Casein kinase II subunit alpha 181 353 - -
Arst1g01477 385 Pfam Protein kinase domain 104 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01477 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Arst1g01477 385 SMART serkin_6 104 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01477 385 ProSiteProfiles Protein kinase domain profile. 104 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01477 385 PANTHER CASEIN KINASE II SUBUNIT ALPHA 64 380 IPR045216 GO:0004674|GO:0006468
Arst1g01477 385 Gene3D Phosphorylase Kinase; domain 1 104 180 - -
Arst1g01477 385 Gene3D Transferase(Phosphotransferase) domain 1 181 371 - -
Arst1g01477 385 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Arst1g01477 385 SUPERFAMILY Protein kinase-like (PK-like) 75 375 IPR011009 -
Arst1g01477 385 FunFam Casein kinase II subunit alpha 90 180 - -
Arst1g01477 385 CDD STKc_CK2_alpha 85 371 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01477 Arst-Chr1 18917353 18923949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01477 102 371 Core Cell Cycle Gene Families AT3G48750 32.226 1.70e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Arst1g01477 Pkinase 1.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01477 K03097 - gmx:100776388 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01477 1 18917353 18923949 Arst1g01477 1 18917353 18923949 ECH