Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01474 ATGAGTTGCAACGGTTGCCGAGTTCTCCGAAAGGGTTGCAGCGAGACATGCATGTTGCGCCCTTGCTTGCAGTGGATCGAGACACCCGAGGCCCAAGGACACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATGTCTTTCATTTCCAATGTACCGGAGGCCCAAAGACCCGCTCTGTTTCAGTCACTGCTGTTTGAAGCATGTGGAAGAACCGTGAATCCGGTTAATGGTGCTGTGGGGCTCTTGTGGACGGGGAACTGGCACGTGTGCCAGGCGGCAGTGGAGACGGTGCTCCGCGGAGGCACGTTGAGGCCCTCGCCGGAGTTTATGGGGATGGAATCGGCGGGTCCGGTGGTGGCCACCGACGAAGCATCGGAGGCAGAGGTCACGTGCGGTGACATATGGAAGAAGGTTCGAGATNNNNNNNNNNNNNNNGTTCGAGATCCGAACCCGAGTTGCAGGTTCACAAGCTCACGGTCTACACGTGTTGCTGCAGGCGCCGCCGGGAAGTGTAAGCGGCTGGAGGAGGTGACGAAGGTCCAGACGGCGGCTGATCTTGATCTTCGTCTGACGCCGATCTTCCTTCAGAAGATCGCCGATTACCGGCGCCGTCCGGGATCGCCGTCGATGACGTCGGAGGAGTCCGTGACGACCACGGCGGAGATTGGAGGAGATCAGTGGGGTCACAGCGGTGAACGGAAAGTTCTCAACCTTTTCATTTGA 735 0.5823 MSCNGCRVLRKGCSETCMLRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPEAQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPSPEFMGMESAGPVVATDEASEAEVTCGDIWKKVRDXXXXXVRDPNPSCRFTSSRSTRVAAGAAGKCKRLEEVTKVQTAADLDLRLTPIFLQKIADYRRRPGSPSMTSEESVTTTAEIGGDQWGHSGERKVLNLFI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01474 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 222 - -
Arst1g01474 244 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Arst1g01474 244 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01474 Arst-Chr1 18634229 18635502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01474 1 244 AS2 family AT4G37540 56.202 1.59e-86 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst1g01474 LOB 4.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01474 - - adu:107481389 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00771 5 6669201 6670620 Arst1g01474 1 18634229 18635502 ECH
Arst1g01474 1 18634229 18635502 Arst1g01474 1 18634229 18635502 ECH
Arst1g01474 1 18634229 18635502 Arst5g00771 5 6669201 6670620 PCT