Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01464 ATGACAGAAACTACAATTTTACCTGTTGGATATAGGTTTCGTCCAACAGAAGAAGAACTTTTAGTTCACTATCTCAATAACAAGCATTTGAGAAATGATGCCGAGATCAAGAACACTGTTTCCCAAATTGATCTTTATAACTTTGATCCTTGGGATTTGCCAGAACAATCGAAGGTGAAATGGGATGATCAAGAATGGTTTTTCTTCAATGAATTGAAACACATAAAAAACAAGCGGTGTAACGGAAAAACTAACGCCGGTTATTGGAAGATCACCGGAAAAGAGCGGATCGTCAAAAGAACAGGGATAGACAATAGCAACGTCGTGTTGAGCCGTGTAATAAAGAATGTTGAGAAAAGGGAAAAGAAGGTTAAGAGAAAAGCAAGCAACATAATCGAAGAGGAAGTAACATGTGAAGAAGATGAACCATGCAGCGAAATTACTGGCTATGTTACCGAAGCAACTACAGAAGATGCAATAATTCCTGATGCATGTGTTTCATCCGAACCGCAAGCACCTCAAGATGTTGACTATGAAATTCTTTCGTCGGAACAACAATCTTCGGTGGCCCATTCCGGTAATGGAAGCAACAATTCTCCGTTGCTTCCATTTGAAGGTATGTGGAAGCAAGATGTCGAGATGAACACGGAATGTTTTTGA 660 0.3955 MTETTILPVGYRFRPTEEELLVHYLNNKHLRNDAEIKNTVSQIDLYNFDPWDLPEQSKVKWDDQEWFFFNELKHIKNKRCNGKTNAGYWKITGKERIVKRTGIDNSNVVLSRVIKNVEKREKKVKRKASNIIEEEVTCEEDEPCSEITGYVTEATTEDAIIPDACVSSEPQAPQDVDYEILSSEQQSSVAHSGNGSNNSPLLPFEGMWKQDVEMNTECF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01464 219 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Arst1g01464 219 SUPERFAMILY NAC domain 4 103 IPR036093 GO:0003677|GO:0006355
Arst1g01464 219 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Arst1g01464 219 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 151 - -
Arst1g01464 219 MobiDBLite consensus disorder prediction 183 203 - -
Arst1g01464 219 Coils Coil 114 134 - -
Arst1g01464 219 Pfam No apical meristem (NAM) protein 8 120 IPR003441 GO:0003677|GO:0006355
Arst1g01464 219 MobiDBLite consensus disorder prediction 183 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01464 Arst-Chr1 18022112 18024936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01464 7 99 NAC Transcription Factor Family AT1G33060 49.474 2.06e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst1g01464 NAM 7.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01464 - - adu:127747689 429.098