Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01447 ATGGACGAAAAGTTTGACACCGCTGACAAAAAGGTGCTGGTTGATATTGTAAAATTGGCACAAAAGAGAGGACTGAAAGGCGAATTCGGAGAATGGAAAGAATTTTTGAACAGTCATGATAAAAAGTTTGGGGCAGGTGTCAGTGACCCATCGAAGAGGTCCCATGAGATATTGGCTGCATTTCTGAAAACATTTTCAAATGAGGATGATTTGAAGTTTTTTGACAACATATTGCGCCATCATTCAAATCAGTATTTACTGGACCAATTGAAAGACAATTCACATGATTCTCCCTATCAGAGTCTAGTCCAACTAACTCTTCAGCACCCCTTGTATCCATTGGATTATTCATTTCCATCAATTGATGAGGGATGGATAATTTTAAACCTTAGGAAAAAAAAGATAATGAAGTCAACTGAAATGTTTGCTGTTGATTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCATTAGTAAAAGTATGTGTGGTAGACCATAATTTAGAGGTCAAGCTAAATGAACTTGTGAAACCGGAGAAAGAAATTGTAGACTATAGAACAGAGATTACTGGTGTTTCTTCTCAAGATCTAGTGGCAGTCACATGCTCCTTATCTGATATACAGAAATCCATGAAGAAATTGTTAGCAAATGGAGCCATATTAGTGGGACACAGTTTGCATAATGATCTCCGTGTGCTGAAGGTATATCATGTTAGAGTGGTTGATACTGCATATATCTTCCAATCCTCAGATGGATCACTTCACAGGAGACCTTCTTTAAATAATTTGTGCAAGACTGTGTTAGGTTATGAAGTTCGAAAAGATGGAGCTCCACATAATTGTCTAGATGATGCACGTGCAGCAATGGAACTTTTTCTTGCAAGGATCAAGCATGGTGTTGATAAAGATTTTCCGGTTCAACTTCAAGAGCCAGTTTCTGAAAGTGAGATGGCAAAGCTGCTGCTTCATAAGATACCAACTACTGTAAACAGCGAAACACTGGATAAAGTTCTTCCTGGAGACTACACAATAGAAGTGAAGCCTTCCAAGAAAGCAGGACAAGGAAATAAATACTCTGCCTTTGCTATATTTAAGAATCCACTGGAAGCACACGATGCCTATGAAAGTATCCAAGGCACTGAATTAAAGGATTCAAATGGGATTCCGCAGAAGCTTGTCAAATTTCAGCTAGATACAGGTATGACTGCAAGTATTTTTGTTCGGAAGATGATGACACGTGAGCCTCGTGACTCTGTTGCGCTGAAGAGAGGTTTACAAACGGACGATGAAGTTCATGTTTCCAAGAAATCAAAGTGTGACAATGACGCCCAGTTGAAGGAGATTGAAGCACTGAATGAACGATTGAAGGAAAGCGAGTCAGAGATTGAATCTTTGAGGGAACAGCTGAAACAGAAGGATCTTGACATCGGGTCTTTGAGGGTAGAATTGAGTAAGAAGGATTATGAAATCAATATGCTCAATAAAATGGTAGCCTCCATAAAAAAGAGGGCAAGAAAGTAA 1521 0.3912 MDEKFDTADKKVLVDIVKLAQKRGLKGEFGEWKEFLNSHDKKFGAGVSDPSKRSHEILAAFLKTFSNEDDLKFFDNILRHHSNQYLLDQLKDNSHDSPYQSLVQLTLQHPLYPLDYSFPSIDEGWIILNLRKKKIMKSTEMFAVDCEMVLCEDGTEALVKVCVVDHNLEVKLNELVKPEKEIVDYRTEITGVSSQDLVAVTCSLSDIQKSMKKLLANGAILVGHSLHNDLRVLKVYHVRVVDTAYIFQSSDGSLHRRPSLNNLCKTVLGYEVRKDGAPHNCLDDARAAMELFLARIKHGVDKDFPVQLQEPVSESEMAKLLLHKIPTTVNSETLDKVLPGDYTIEVKPSKKAGQGNKYSAFAIFKNPLEAHDAYESIQGTELKDSNGIPQKLVKFQLDTGMTASIFVRKMMTREPRDSVALKRGLQTDDEVHVSKKSKCDNDAQLKEIEALNERLKESESEIESLREQLKQKDLDIGSLRVELSKKDYEINMLNKMVASIKKRARK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01447 506 Gene3D - 136 308 IPR036397 GO:0003676
Arst1g01447 506 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 310 IPR047021 GO:0004527
Arst1g01447 506 Coils Coil 441 482 - -
Arst1g01447 506 SMART exoiiiendus 140 301 IPR013520 -
Arst1g01447 506 FunFam Small RNA degrading nuclease 3 136 310 - -
Arst1g01447 506 CDD REX1_like 142 293 IPR034922 -
Arst1g01447 506 SUPERFAMILY Ribonuclease H-like 141 297 IPR012337 -
Arst1g01447 506 Gene3D - 434 503 - -
Arst1g01447 506 Pfam Exonuclease 143 292 IPR013520 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01447 142 292 C2H2 Transcription Factor Family AT2G48100 32.099 2.84e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01447 K14570 - gmx:100785565 715.301