Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01423 ATGCCTCCAACTCCACAAGAACACGAGCAACCCCTCTTACTGGACTCACCGCAACAAGCCGATGAGTTAGAAGAAACAGCCTACGATTCTTCCGAGAAGATCGTGGTAGTTGGAATCGACGAGTCAGAGTACGAGTCCGGGAACTGGGCCCGGGCCCCACCGTTCTCATGGAGGAAGCTATGGCTATTCACGGGCCCGGGCTTTCTCATGAGCATAGCGTTCTTGGACCCAGGGAACCTGGAAGGAGACCTGCAGGCCGGTGCCATTGCGGGGTACTCGCTGCTGTGGCTGCTCATGTGGGCCACAGCCATGGGCCTGCTGATCCAGCTGCTGTCGGCCCGGCTCGGCGTGGCAACGGGCAGGCACCTGGCGGAGCTTTGTCGGGAGGAGTACCCGACGTGGGCTCGGAACGTGCTGTGGGTTATGGCTGAGGTGGCACTTATTGGTTCTGATATTCAGGAGGTTATTGGTAGTGCTATTGCTATAAGGATCCTTAGTAATGGCTTTGTGCCTCTTTGGGCTGGAGTCACCATAACTGCTCTTGATTGTTTTGTTTTTCTTCTTCTGGAGAATTATGGTGTGCGGAAACTGGAAGCTGTTTTTGCTGTTCTCATTGCGATAATGGCGGTTGCCTTTGCATGGATGTTTGGTGAAACAAAGCCCAGTGGCAAGGAATTGCTTCTTGGTATTTTGATTCCGAAGCTTAGCTCTAGAACTATACAGCAGGCTGTTGGAGTTGTGGGCTGCATTATTATGCCTCATAATGTGTTCTTGCACTCTGCGCTTGTTCAATCAAGGAGGGTTGATCATCGGAATAAAGGCCGAGTTCAAGAAGCTCTTAATTATTACTCAATAGAGTCCACCATGGCCCTTATAGTCTCCTTTGTTATTAATATATTTGTCACAACCGTTTTTGCTAAGGGGTTCTATGGTACCGAACTAGCAAACAACATTGGTCTTGTAAATGCAGGACAGTATCTTCAGGAGCAGTATGGGGGTGGATTATTTCCAATACTGTATATATGGGGTATTGGGTTATTAGCAGCAGGACAAAGTAGCACTCTTACGGGTACCTATGCAGGTCAATTTATCATGGGGGGTTTCCTAAATTTAAGGTTGAAAAAATGGATGAGAGCACTAATTACACGAAGTTTTGCAATTATTCCAACTATGATAGTTGCTCTTATTTTCGACACCTCTGAGCAATCGTTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTTTGGTGTCAAAGGAGCAGATAATGGGAAGTTTCAGAATTGGCCCCGTCCTCCAGATTATTTCATGGCTCGTGACTGTTCTGGTGATAGTGATTAACGGCTACCTTCTGCTGGAATTCTTCTCGCACGAAGTGAATGGCGCAATAGTCGGCACTGTAGTGTGCGTGCTAACAGCTGCATATGTTGCATTCATAGTATACCTTATTTCACGGGCCGTTACGTATTCACCTTGGCAAAGTGTGACACAGCGAAAGTCAAATACTAACTCAGAGTTGGAGTAA 1563 0.4722 MPPTPQEHEQPLLLDSPQQADELEETAYDSSEKIVVVGIDESEYESGNWARAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARNVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWAGVTITALDCFVFLLLENYGVRKLEAVFAVLIAIMAVAFAWMFGETKPSGKELLLGILIPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRRVDHRNKGRVQEALNYYSIESTMALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQEQYGGGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEQSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLQIISWLVTVLVIVINGYLLLEFFSHEVNGAIVGTVVCVLTAAYVAFIVYLISRAVTYSPWQSVTQRKSNTNSELE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01423 520 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 48 501 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 58 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 Hamap Divalent metal cation transporter MntH [mntH]. 46 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 NCBIfam Nramp family divalent metal transporter 65 434 - -
Arst1g01423 520 PRINTS Natural resistance-associated macrophage protein signature 169 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 PRINTS Natural resistance-associated macrophage protein signature 350 369 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 PRINTS Natural resistance-associated macrophage protein signature 139 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 PRINTS Natural resistance-associated macrophage protein signature 194 215 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 PRINTS Natural resistance-associated macrophage protein signature 412 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 PRINTS Natural resistance-associated macrophage protein signature 243 266 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 PRINTS Natural resistance-associated macrophage protein signature 378 395 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst1g01423 520 Pfam Natural resistance-associated macrophage protein 81 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01423 Arst-Chr1 16910216 16914097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01423 5 505 Inorganic Solute Cotransporters AT2G23150 76.938 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01423 K21398 - gmx:100807811 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01423 1 16910216 16914097 Arst1g01423 1 16910216 16914097 ECH
Arst5g00799 5 6996465 6999735 Arst1g01423 1 16910216 16914097 PCT