Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01403 ATGGAATCAATTCCTTACACGATCCCTTCTTCTAAGCTCCAATCACTAATTTTTTACAAAACACCCACCAGAACTCGATCCTCCAAGCTCCTGCCTCTTCACCCTCCCCCACTTCCAATCAAACCCTTCTATTATTCACCTAAATGCCTCCCTCTCCGTTACCATCGCCTCCGCTGCCTCGCTCACTCCAACGCTAACCACCACCATCACAGCCACAGCGATCATAACCACCACGAGCACGAGCACGAGCACGACCATCACCATCACCACCACCACCACCACCACCACGCGCATCATGCCATCGACAGCGCTAACCTCACGGGACCACAACGAGCGATCATCGGGTTCGCGAAAGCCACGAGGTGGATGGACTTGGCCGATTTCTTAAGGGAGCACTTGCATCTTTGCTGCTTCTCAACAGCTTTATTCGTGGCAGCTGCCATTTGCCCTCACACTTTGCCAAAGCCTCTCGTTAAGCGCTTCCAACACTCCCTCATCATCCTTGGATTTCCTTTGGTTGGGGTTTCGGCTTCGCTGGATGCTCTAATTGAACTTAGCAGTGGAAAAGTGAACATCCATGTACTAATGGCGATGGCTGCTTTTGCGTCTGTTTTTATGGGAAACTCTTTGGAAGGAGGGTTGCTTCTTGCCATGTTCAATCTCGCGCATATAGCTGAGGAGTACTTCACTGGACGGTCGATGATCGATGTTAAAGAGTTGAAAGAGAATCATCCTGAGTTTGCACTTGTTCTTGACACCAGTGGTGATAAGCTTCCTAATACATTCAACTTGGCGTACAAGAGTGTTCCTGTGCATGATGTAACTGTAGGATCATATATCCTTGTTGGTGCTGGTGAGTCTGTGCCTGTAGATTGCGAAGTTTTCCAAGGCAACGCTACAATTACCATCGAGCACTTGACAGGGGAAATCAAACCATTGGAGGCCAAAATTGGAGACAGGATACCTGGTGGTGCAAGGAACTTAGATGGGAGGATAATTGTAAAGGTAACAAAGACATGGAACGAATCAACCCTAAACCGAATTGTGCAATTGACTGAAGAAGCACAGTTGAATAAACCAAAACTTCAAAGATGGTTGGACGAATTTGGTGAACGTTACAGCAAAGTAGTTGTGGTATTATCAGTTGCAATTGCCGTTATTGGGCCAATTTTATTTAAGTGGCCTTTCATTAGTACACCAGCATGCAGAGGTTCAGTTTACAGAGCCCTAGGGCTCATGGTTGCAGCATCTCCATGTGCTTTGGCTGTGGCCCCATTAGCATATGCAACAGCAATTAGTTCCTGCGCAAGAAAGGGGATATTACTCAAAGGTGGACATGTGTTAGATGCTCTAGCTTCTTGTCATACTATTGCATTTGATAAAACAGGAACATTAACCACAGGAGGACTTCTATTCAAGGCAATTGAGCCCATTTATGGTCATAATGTCAGAAAGAATGAGTCAAACATTTCTTCCTGTTGCATCCCTACCTGTGAGAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGTACTACTCATCCCATTGGAAGGGCTGTTGTTGACCATAGCAAAGGCAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTACTTCCCTGGAAGGGGCCTTATTGCTACTGTTAACAGCATTGAGTCAGGAACTGGAAGTGCTAAGCTATTGAAAGCATCACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCATTCTGAAGAGGAGTCAGAAAAGATCAAGGAAGCTGTTAATACATCTTCGTATGGAAGTGAATTTGTTCATGCTGCTCTTTCGGTTAATAAGAAGGTGACACTTATTCACCTAGAAGATAGGCCTCGTCCTGGGGTTTTTAATGTTATTCAAGAATTGCAGAATGAAGCAATGTTACGGGTGATAATGTTAACTGGTGATCATGAGTGTAGTGCAAGGAGGGTTGCAAATGCTGTGGGCATCAGTGAGTTTCATTGCAACCTGAAACCTGAAGATAAACTGAGTCATGTAAAAGACACATCAAGAGATACAGGAGGAGGCTTAATTATGGTTGGTGAAGGAATCAATGATGCCCCTGCACTTGCTGCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCTGATGTGTTATTGCTTCGTGAAAATATTTCTGCAGTACCATTTTGTATCGCCAAGTCTCGCCAAACAACAACACTGATTAAACAAAATGTGGCTCTGGCATTGTTCTGCATTACCATGGCTTCTCTTCCATCAGTTTTGGGATTTCTGCCCTTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTTTGTCTCAATTCTATTCGTGCCTTAAACGAACCATCTTGGTCATGGAAGCAGGATTTGTTACATTTGATTGGCGAGGTTAAATCTAGGCTTCTTTCTCTTGGGACAAATATTAAGGGCTCAAGCAACATTACAACGGCGAGTTTATAA 2499 0.4462 MESIPYTIPSSKLQSLIFYKTPTRTRSSKLLPLHPPPLPIKPFYYSPKCLPLRYHRLRCLAHSNANHHHHSHSDHNHHEHEHEHDHHHHHHHHHHHAHHAIDSANLTGPQRAIIGFAKATRWMDLADFLREHLHLCCFSTALFVAAAICPHTLPKPLVKRFQHSLIILGFPLVGVSASLDALIELSSGKVNIHVLMAMAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTGRSMIDVKELKENHPEFALVLDTSGDKLPNTFNLAYKSVPVHDVTVGSYILVGAGESVPVDCEVFQGNATITIEHLTGEIKPLEAKIGDRIPGGARNLDGRIIVKVTKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSVAIAVIGPILFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLLFKAIEPIYGHNVRKNESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSKGKDLPSVSVESFEYFPGRGLIATVNSIESGTGSAKLLKASLGSVDFITSFCHSEEESEKIKEAVNTSSYGSEFVHAALSVNKKVTLIHLEDRPRPGVFNVIQELQNEAMLRVIMLTGDHECSARRVANAVGISEFHCNLKPEDKLSHVKDTSRDTGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTTLIKQNVALALFCITMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPSWSWKQDLLHLIGEVKSRLLSLGTNIKGSSNITTASL 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01403 832 NCBIfam heavy metal translocating P-type ATPase 192 790 IPR027256 GO:0006812|GO:0016020|GO:0019829
Arst1g01403 832 SUPERFAMILY Calcium ATPase, transmembrane domain M 194 755 IPR023298 -
Arst1g01403 832 Pfam haloacid dehalogenase-like hydrolase 456 701 - -
Arst1g01403 832 CDD P-type_ATPase_HM 136 790 - -
Arst1g01403 832 Gene3D - 451 739 IPR023214 -
Arst1g01403 832 PRINTS P-type cation-transporting ATPase superfamily signature 611 622 - -
Arst1g01403 832 PRINTS P-type cation-transporting ATPase superfamily signature 634 644 - -
Arst1g01403 832 PRINTS P-type cation-transporting ATPase superfamily signature 458 472 - -
Arst1g01403 832 PRINTS P-type cation-transporting ATPase superfamily signature 688 707 - -
Arst1g01403 832 PRINTS P-type cation-transporting ATPase superfamily signature 712 724 - -
Arst1g01403 832 MobiDBLite consensus disorder prediction 82 99 - -
Arst1g01403 832 MobiDBLite consensus disorder prediction 65 101 - -
Arst1g01403 832 NCBIfam HAD-IC family P-type ATPase 266 479 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01403 832 NCBIfam HAD-IC family P-type ATPase 585 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g01403 832 ProSitePatterns E1-E2 ATPases phosphorylation site. 460 466 IPR018303 -
Arst1g01403 832 SUPERFAMILY Calcium ATPase, transduction domain A 266 351 IPR008250 -
Arst1g01403 832 Pfam E1-E2 ATPase 266 438 - -
Arst1g01403 832 SFLD p-type atpase 440 741 IPR044492 -
Arst1g01403 832 Gene3D - 469 619 IPR023299 GO:0000166
Arst1g01403 832 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 57 826 - -
Arst1g01403 832 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 57 826 - -
Arst1g01403 832 SUPERFAMILY HAD-like 456 788 IPR036412 -
Arst1g01403 832 Gene3D - 232 356 - -
Arst1g01403 832 SFLD C1.7: P-type atpase like 440 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01403 Arst-Chr1 15944250 15953997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01403 92 813 Primary Pumps ATPases AT4G37270 75.069 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01403 K01534 - gmx:100776309 1293.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01403 1 15944250 15953997 Arst1g01403 1 15944250 15953997 ECH