Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01378 ATGCATTACCTCCACTCACACTTGCTCCTTCTCATTTTGGTGTTAACCGCCGATGCCAGTCCCTCAACGGAAGTAAACACAATGCTACCATCCGACGCCGTTTCACTGCTCTCCTTCAAGTCAAAAGCAGACCTCGACAACAAGCTTCTATACGCCTTAAACGAGCGCTACGACTACTGCGAGTGGCAAGGAGTGAAGTGCGCACAAGGCAGAGTGGTTCGCTTCGTCGTCCAAGGCTTCNNNNNNGTCCAAGGCTTCTCTCTCAGGGGCACCTTCGCCGCCGACACACTCGCCCGCCTCGACCAGCTCCGCGTCCTCAGCCTCCGTAACAACTCACTCTCCGGCACCATCCCTGACCTCTCCCCTCTTAAAAACCTCAAGTCCCTCTTCCTCGACCGTAACCGCTTTTCCGGAACGTTCCCGCTCTCGGTTCTCACGCTTCATCGGTTAGTTACTCTCTCACTCGCTCATAACGAGCTTGCCGGTCCGATTCCGGTTCGGCTCAACTCGCTCGACCGGTTAATCTCCCTCCGGCTGGATTCTAACTACTTTAACGGCACTCTCCCTGCGCTGAATTTGTCGTTTCTTGAAACGCTTGATGTTTCGAATAACAACCTTACCGGTCCCGTGCCTGTTACGCCCACGCTCGCGAAGTTCGATGCGCCGTCGTTTTCAGGAAACAATGACCTCTGCGGAGAGATTATCCACAAGCCATGCGATCGGCATTCTAGATTCTTCGGTGGCGGTGGCTCTTCTGCTGCCACGTCATCCGGCGCGCCGCTAGGGCAGAGCGAGCAGGGGATCGTGGTGGTTCATTCCCCGATCAAGGAAAGGAAGCACAAGAGCAGTGGATTGGTTCTCGGAATCTCCGTCGCGGCCGCGGTTCTCGTTGGCGCAGGGCTTGCGGCGGTTGCGGTGGCGAGGAAGAAGAATAGAAACAAGCAAGGGGGAATGCTCGGGGAAAAATTCGAGACGGAGAAAACGACGGCGTTGGAGGTTGAAACCGGAAGAAATAACCCTGCGCAGTTGGTGAGGGAAAGGGAAAACGAAAACGACGTCCTTTCAACGATGAAGGTGAAGAGGATAGAGGAGATAGAGAGGGCGCATAAGAGTGGGAAGTTGATATTCTGCTACGGTGAGGCGCAGCCGTACACGCTGGAGCAGCTGATGAGGGCGTCGGCGGAGCTTCTTGGGAGGGGGAGCGTGGGGACCACTTACAAGGCGGTTCTTGATTCGCGGCTGATCCTGACAGTTAAGAGAATGGACGCCGGGAAGACGGCAGCGATGAGCGGAGAGGTGTTTGAGAGGCATATGGAGATGGTTGGTGCTCTTCGGCACCCGAATTTGGTTCCGGTGAGGGCTTATTTTCAGTCCAAGGGCGAGAGGCTTGTCATCTATGATTATCAGCCAAATGGAAGCCTTTTCAATCTTGTTCATGGCTCAAGATCAGCAAGGGCAAAGCCCCTCCATTGGACATCATGCTTGAAAATAGCAGAAGATGTAGTTCATGGACTTGCTTATGTACATCAAGCTTCATCCTTAATTCATGGCAACCTAAAATCCTCGAATGTCCTTCTTGGACCAGACTTTGAAGCGTGCATTACAGACTACGGTTTGTCCTTTCTGGCAGATTCTTCGGTCGCTGAAGATGCCGATTCCACAGCCTATAAAGCACCAGAAGTCCGCCAGTCTAGCCGCAGGGCATCTTCCAAGTCTGATGTGTATTCTTTCGGCGTGCTTCTGCTGGAGCTTTTGACCGGTAAACACCCCTCTCAACACCCTGTGCTTGTGCCAACGGATTTGCAAGACTGGGTTAGAGCAATGAGGGATGACGATGATAGCGAAGACAACCGGCTCGAAATGCTCACAGAGGTTGCCAGTATTTGCAGTGCTACCTCGCCAGAGCAGAGACCCGCAATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGGAGAGCGCAACATGA 1968 0.5315 MHYLHSHLLLLILVLTADASPSTEVNTMLPSDAVSLLSFKSKADLDNKLLYALNERYDYCEWQGVKCAQGRVVRFVVQGFXXVQGFSLRGTFAADTLARLDQLRVLSLRNNSLSGTIPDLSPLKNLKSLFLDRNRFSGTFPLSVLTLHRLVTLSLAHNELAGPIPVRLNSLDRLISLRLDSNYFNGTLPALNLSFLETLDVSNNNLTGPVPVTPTLAKFDAPSFSGNNDLCGEIIHKPCDRHSRFFGGGGSSAATSSGAPLGQSEQGIVVVHSPIKERKHKSSGLVLGISVAAAVLVGAGLAAVAVARKKNRNKQGGMLGEKFETEKTTALEVETGRNNPAQLVRERENENDVLSTMKVKRIEEIERAHKSGKLIFCYGEAQPYTLEQLMRASAELLGRGSVGTTYKAVLDSRLILTVKRMDAGKTAAMSGEVFERHMEMVGALRHPNLVPVRAYFQSKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVVHGLAYVHQASSLIHGNLKSSNVLLGPDFEACITDYGLSFLADSSVAEDADSTAYKAPEVRQSSRRASSKSDVYSFGVLLLELLTGKHPSQHPVLVPTDLQDWVRAMRDDDDSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQEIKESAT 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01378 655 Gene3D Phosphorylase Kinase; domain 1 355 468 - -
Arst1g01378 655 SUPERFAMILY Protein kinase-like (PK-like) 395 650 IPR011009 -
Arst1g01378 655 Gene3D Ribonuclease Inhibitor 191 239 IPR032675 -
Arst1g01378 655 ProSiteProfiles Protein kinase domain profile. 391 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01378 655 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Arst1g01378 655 Pfam Protein kinase domain 394 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01378 655 Gene3D Transferase(Phosphotransferase) domain 1 470 655 - -
Arst1g01378 655 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 652 IPR046959 -
Arst1g01378 655 FunFam Leucine-rich repeat receptor-like protein kinase 149 241 - -
Arst1g01378 655 SUPERFAMILY L domain-like 30 232 - -
Arst1g01378 655 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01378 Arst-Chr1 15072140 15076894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01378 14 654 Receptor kinase-like Gene Family AT3G50230 53.718 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst1g01378 Pkinase 5.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01378 - - gmx:100783086 773.852