Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01377 ATGGAGACATCGGAGAATTGTTCTGTGAAAGTTGCTCTTCACATTCGTCCGCTCATTGCTGATGAACGACAGCAAGGTTGCAGAGAATGCGTTTCAGTTACGCCTGCGAAGCCTCAGGTCCAAATTGGGTCACATTTCTTTACATTTGATCATGTTTACGGAAATGGTGGGTCTCCTTTGGCTGATATGTTCGAAGAATGCATTGCCCCGTTAGTTGATGGCTTATTCCAAGGATATAATGCTACTGTACTTGCGTATGGCCAGACAGGATCTGGGAAAACATATACAATGGGAACTGGCTATAGTGACAATTGTCAGACTCAGGCTGGATTAATTCCTAAGGTCATGAATGCCTTGTTCAGCAAGGTTGAAACACTAAAGCATCAGACAGAATTTCAGTTGCATGTGTCCTACATTGAGATTTTGAAGGAAGAGGTGAGGGACTTGTTAGATTCTGTATCTAACAGTAAATTGGAATCTGCTAATGGCAATTCTGGAAAAGCAACTGTTCCTGGCAGAACACCGATACAAATTCGTGAAACCTCAAGTGGAGTCATAACACTGGCAGGATCAACTGAAGTTGCTGTGAGTACACTACAGGAGATGTCTACTTGCTTGGAGCAGGGTTCTTTAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATCTTCACAATCACACTAGAACAGATGCGCAAGCTCCATTCAATTTCTCCCGACAATGACTCTTCAGACGAGGATATGGGTGAAGAATACCTTTCTGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGATGGTGTTCGTTTAAAAGAAGGCATACACATCAATAAAGGTCTTCTTGCACTTGGAAATGTCATAAGCGCATTGGGAGATGAGAAAAAGCGAAAGGAGGGTATGCATGTCCCGTATCGGGATAGCAAACTCACTCGACTTTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGTCCTGCCGACATCAATGCTGAGGAAAGTCTTAACACTCTCAAATATGCAAATCGTGCTCGCAATATTCAAAATAAGCCTATTGCTAATCGAGATTTGATATCCAATGAGATGCATCAAATGCGTCAACAGTTAAAGTACTTGCAGGCTGAACTTTGTGCTCGGGGAGGAACTCCAGCTGATGAAGTGCGGGTTCTCAAGGAAAGGATTGCGTGGCTTGAGGCGACTAATGAGGGCCTCTCTCATGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGACAACTGTGAAATTGATGAACCAGATGGTCATATTTATCTTGAAAGACACTTTCAGAGCTCTGTTTCATCTGATCATCCCATGATTGAAAGTATATCTGGTGACGATTCAGGTGAAAGTGATGAAGCAGTAAAGGAATTGGAGCATGCACTTTTGCAGAATACCATGGATAAAGAGATGAATGAGTTAAATAAGCGCTTAGAGCAGAAAGAGTCTGAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAAAAAATTATGGAGCTTGAAGAGGAAAAAAGAAAAGTGCAGCAAGAGAGGGACCGTTTGTTGCATGAGGTAGAGAATCTTTCAGCTAATATTGATGGACTAGCACAGAAATCTCAAGATGTTCGTGGCCAAAAATTGAAAGCACTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAACCAGGTGCTGCTACTAAAGCAAAAGGAGAAGAGCGAAGAAACTGCAAAAAAATTGCAAGCTGAAATACAGTACATCAAGGCTCAAAAGGTCCAATTGCAGCAAAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGAGAAAAGGAGTTACTTCAGTTGAAAAAGGAGGGAAGAAGGAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGCCAAAAAAAGGTGCTTCATAGGAAGACAGAGGAAGCAACAATAGCCACAAAAAGGCTAAAGGAATTATTGGAAGCCCGCAAATCTTCTCCACGTGAAAACTCTGCTTATTCAAATGGACACCTTCAACCTGGGCTGGTTAATGAGAAATCCCTCCAAAAATGGCTTGATCAGGAGCTTGAGGTCGTGGTACATGTGCATGAAGTTCGTGCTGAATTCGAAAAGCAAAAGCAGGTCCAAGCTGCATTGGAGGAAGAGTTGGCTACACTGAAACAAGTCCATCAGTTCTCGGATTGCCAGAGTATCCCTACAGGACAGAACAAATATTCCAGATTATTATCCATGCCACCGGATGTAAAAGTCTCAAGAATAGCTTCTCTTGAGAATATGCTGGGCATGTCTTCGGCTGCTTTGAAAGCCATGGCTTTACAACTTACAGAGGCTGAAGCAAGGGAACGTGCATTAAGTAACCGTGGACGTTGGAACCAGTTACGCTCAATGGGAGATGCTAAGAATGTGCTTCAGTACTTATTCAATGCTACAGCAGAAGCAAGGTGTCAATTGTGGGAAAAGAATATAGAACTTCAGGACTTGAAAGAGCAAATAAACGAACTAGCAAGGCTACAGAAAGAAAGTGAAACAGAGAGAAAAGAATTTCTAAAGGAGCAAACACTTAAGGAAGAAGCTGTTTCTGTCGCCTTGTACACATCAATGGAAAATTCTCGGTCCTTGAAACACCTTGCGGATGAATTGAGTGGCCCATTGTCTCCCATGTCACTTCCTGCAACAAAGCAACTTAAATTCACCCCTGGAGTTGTTAATGGGTCAGTTACAGAGTCAGCTACTATTATGGACAATGGACGAAAGATGATACCCATTGCGGAGTTGTCAGCAAGGAGGCTAGCAGCTGTTGGGCAAGCTGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGATACAGTTCAAATGGAAATGGCAGAAACCGTGGAAACTTTCAGAATGGATCAAACACAGCGACGAAACAATCATGAGGTCAAGGCCTCGAGCACAGGCCTTGATCAATGCTATGTGA 3075 0.4276 METSENCSVKVALHIRPLIADERQQGCRECVSVTPAKPQVQIGSHFFTFDHVYGNGGSPLADMFEECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYSDNCQTQAGLIPKVMNALFSKVETLKHQTEFQLHVSYIEILKEEVRDLLDSVSNSKLESANGNSGKATVPGRTPIQIRETSSGVITLAGSTEVAVSTLQEMSTCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSISPDNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGVRLKEGIHINKGLLALGNVISALGDEKKRKEGMHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPIANRDLISNEMHQMRQQLKYLQAELCARGGTPADEVRVLKERIAWLEATNEGLSHELHEYRSRCAFVDNCEIDEPDGHIYLERHFQSSVSSDHPMIESISGDDSGESDEAVKELEHALLQNTMDKEMNELNKRLEQKESEMKRIGIDTEALKEHFGKKIMELEEEKRKVQQERDRLLHEVENLSANIDGLAQKSQDVRGQKLKALEAQILDLKKKQENQVLLLKQKEKSEETAKKLQAEIQYIKAQKVQLQQKMKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKKVLHRKTEEATIATKRLKELLEARKSSPRENSAYSNGHLQPGLVNEKSLQKWLDQELEVVVHVHEVRAEFEKQKQVQAALEEELATLKQVHQFSDCQSIPTGQNKYSRLLSMPPDVKVSRIASLENMLGMSSAALKAMALQLTEAEARERALSNRGRWNQLRSMGDAKNVLQYLFNATAEARCQLWEKNIELQDLKEQINELARLQKESETERKEFLKEQTLKEEAVSVALYTSMENSRSLKHLADELSGPLSPMSLPATKQLKFTPGVVNGSVTESATIMDNGRKMIPIAELSARRLAAVGQAGKLWRWKRSHHQWLIQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINAM 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01377 1024 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1013 IPR027640 GO:0003777|GO:0007018
Arst1g01377 1024 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1013 IPR027640 GO:0003777|GO:0007018
Arst1g01377 1024 Coils Coil 375 395 - -
Arst1g01377 1024 Coils Coil 853 888 - -
Arst1g01377 1024 Coils Coil 731 758 - -
Arst1g01377 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Arst1g01377 1024 CDD KISc_KIF4 7 368 - -
Arst1g01377 1024 Coils Coil 590 638 - -
Arst1g01377 1024 Coils Coil 523 564 - -
Arst1g01377 1024 Gene3D Kinesin motor domain 1 395 IPR036961 -
Arst1g01377 1024 Coils Coil 803 823 - -
Arst1g01377 1024 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Arst1g01377 1024 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Arst1g01377 1024 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Arst1g01377 1024 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Arst1g01377 1024 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Arst1g01377 1024 Coils Coil 139 159 - -
Arst1g01377 1024 FunFam kinesin-like protein KIN-4A isoform X1 2 395 - -
Arst1g01377 1024 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Arst1g01377 1024 Coils Coil 671 691 - -
Arst1g01377 1024 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Arst1g01377 1024 Pfam Kinesin motor domain 15 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Arst1g01377 1024 Coils Coil 491 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01377 Arst-Chr1 15060653 15071839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01377 49 413 Calmodulin-binding Proteins AT5G65930 36.164 1.49e-53 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01377 - - gmx:100790341 1665.2