Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01374 ATGTGGGATCTCAATGACTCACCCGATCGGAGGAGAAAGGTTGAGGAATCCGAAGAAGGTTGCTCTTCTCTCAAGAACTCCATAGACGGAGACGACGATAACAACAACAACAACAATAATAATCATAATAAAATTAGATATAATTTACATATGAAGAGCAACAGCCGACATGAAGAAGATAGAAGAAGCAAGATATTCGGGTTCTCAGTAACCCACGGTGATGATGATGAAGAAGATGAAGATGAAGATTCCATGGATAGTGAGAACCACAGCCAGGTAGTGACTCGGCAGTTTTTCCCCATGGAGGAGGCTGATATAGCCGCCGCATCATCACCGGCTGGAAGCGGCGGTGACGGTGACGGCGACGGCGACGGAGGTGGCTCTACTTTCCCTCGTGCCCACTGGGTAGGCGTGAAATTTTGCCAATCAGAAACACTTGGTGCTGGAAAATCATCACTGGAAGCTTCTCAACCCATGAAAAAAAGTCGCCGAGGACCACGGTCAAGAAGCTCACAGTACAGAGGAGTCACTTTTTACAGAAGAACCGGTCGATGGGAGTCTCATATTTGGGACTGTGGAAAACAAGTGTATCTGGGTGGATTTGACACTGCACATGCAGCTGCTCGTGCATACGATAGAGCAGCGATTAAGTTCCGAGGAGTGGAGGCAGACATAAACTTTAACATTGAAGACTACGACACGTGTTTTAAACAGATGAGCAATCTGACTAAGGAAGAGTTTGTGCACGTTCTTCGCCGACAAAGCACTGGGTTTCCAAGAGGAAGCTCTAAATATAGAGGTGTAACTTTGCACAAATGCGGAAGATGGGAAGCTCGAATGGGACAATTTTTAGGGAAAAAGTACGTCTATCTGGGTTTGTTTGACACCGAGATTGAAGCTGCAAGGGCCTATGATAAAGCAGCAATAAAATGCAACGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATCTACGAAAATGAGCTTAATTCCGTAGAACCCACAGGTAATGCTGCAGATCACAATCTAGATTTAAGTTTGGGCAATTCAAGTTTCAAATCTAGCAACAATAATCGAGCATTGGGAAATCACACCACAAATGTTCAAGATCATCACCAGCAGCTCATGCCATCTGAATCCAATTGGCGAAATGGTGCAAGCAAGCCTAAGCTGGTGAATATCCTACCAAAACCGTGTAATAGAAACATGGAAGCACATGGAGGAAGGGATTTGCACGGAGAGAGTGAAGCCTTGAGGATGCTGAGTCAAACCCACATCCATTCTACTACTTGTTCAGCATCTAATGAAACGCAAAGATATGGACCCTACAGGTCCCCAGGGGAGCCTCAAATGCTTCACAATTTTGCACATCTTCAACCACCAAATTTTTATTTCTCCAGCAGCAGTAGTAATGGGGGTCGCATCGGGAATGATCTTTCATTATCAATGGCGGATCATCATCAACAACAGTTGCAACCAGGACCTCCACACCATTATTTGGCCACTGCTGCAGCATCATCAGGATTCCCACCACAGATTATTAGACCCTCTTCTCATCACCAAGGTTGGCTGCAGAAAAATGGCTTCCACACAATTATGAGACCCTCCTAA 1611 0.4544 MWDLNDSPDRRRKVEESEEGCSSLKNSIDGDDDNNNNNNNNHNKIRYNLHMKSNSRHEEEXRRSKIFGFSVTHGDDDEEDEDEDSMDSENHSQVVTRQFFPMEEADIAAASSPAGSGGDGDGDGDGGGSTFPRAHWVGVKFCQSETLGAGKSSLEASQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYDTCFKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSVEPTGNAADHNLDLSLGNSSFKSSNNNRALGNHTTNVQDHHQQLMPSESNWRNGASKPKLVNILPKPCNRNMEAHGGRDLHGESEALRMLSQTHIHSTTCSASNETQRYGPYRSPGEPQMLHNFAHLQPPNFYFSSSSSNGGRIGNDLSLSMADHHQQQLQPGPPHHYLATAAASSGFPPQIIRPSSHHQGWLQKNGFHTIMRPS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01374 537 SUPERFAMILY DNA-binding domain 172 230 IPR016177 GO:0003677
Arst1g01374 537 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 91 429 - -
Arst1g01374 537 ProSiteProfiles AP2/ERF domain profile. 173 229 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 MobiDBLite consensus disorder prediction 51 73 - -
Arst1g01374 537 PRINTS Ethylene responsive element binding protein signature 266 277 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 PRINTS Ethylene responsive element binding protein signature 304 324 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 MobiDBLite consensus disorder prediction 150 174 - -
Arst1g01374 537 MobiDBLite consensus disorder prediction 1 26 - -
Arst1g01374 537 MobiDBLite consensus disorder prediction 27 48 - -
Arst1g01374 537 MobiDBLite consensus disorder prediction 1 132 - -
Arst1g01374 537 CDD AP2 264 324 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 Gene3D AP2/ERF domain 172 231 IPR036955 GO:0003700|GO:0006355
Arst1g01374 537 Gene3D AP2/ERF domain 264 323 IPR036955 GO:0003700|GO:0006355
Arst1g01374 537 SMART rav1_2 265 328 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 SMART rav1_2 173 235 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 FunFam AP2-like ethylene-responsive transcription factor 264 324 - -
Arst1g01374 537 MobiDBLite consensus disorder prediction 336 388 - -
Arst1g01374 537 FunFam AP2-like ethylene-responsive transcription factor 172 231 - -
Arst1g01374 537 MobiDBLite consensus disorder prediction 336 410 - -
Arst1g01374 537 Pfam AP2 domain 173 221 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 Pfam AP2 domain 264 313 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 SUPERFAMILY DNA-binding domain 264 324 IPR016177 GO:0003677
Arst1g01374 537 CDD AP2 173 230 IPR001471 GO:0003700|GO:0006355
Arst1g01374 537 ProSiteProfiles AP2/ERF domain profile. 265 322 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01374 Arst-Chr1 14741340 14746867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01374 1 352 AP2-EREBP Transcription Factor Family AT4G36920 62.088 1.99e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst1g01374 AP2 3.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01374 K09284 - gmx:100792442 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01374 1 14741340 14746867 Arst1g01374 1 14741340 14746867 ECH
Arst5g00828 5 7365576 7368630 Arst1g01374 1 14741340 14746867 PCT