Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01332 ATGGCGGCCAAAACCAGCGACGACTGTGACAAGGGCTTCGCAGACAGCTACATGCTGCTGAAGCACGAAGACGCCCGGTTCTTCGATCTGCTTCACGTCCTCACTTCGCGAAACATGTCGCGAAGGAGGTTTGTGGAGAGCCACGCGGAGGGCGAAGTGGACGAGAGCTTCGGCCACCGGTGGCTTATATTCATCTCTATCTTGGCCCAGAAGCTCTTGCAGTTGATGGCCAAGCCATTAGCGTTCTTTGGGATCTGCGTTGAGCTTCTCATCAACTTGATTGCCCTCAACGGTGGTATCTTCTATATCATATTTAACTTCATAAGAGGTAATAAGCAGCTAGAATGGTGTAATGAAGCACCCTTCTACACTCTTGGTCCACTAACAACTGATATTGCTCCTGGTTATGATCACATTACCTCTGCTATTGGTGCTGCCAATATCGGAGTACTTGGTATAGCTCTTCTCTGCCATGTAACTTCAAAAGAACATCTCGGTCTACCAAATCGTGATTATGTGAAGACCGGAGTTATATCTTACAAGATAGCTGCTCATGTTGCTGACTTAGAGAAGGGTCATCCACATGCTCAAGCCTGGGATGATGCACTAAGTAAGGCGAGATTTGAATTCCGATGGATGGATCATTTTGCTTTATCTTTGGATCCAATGACGGCCATGTCTTTCAATGATGAAACATTGCCATCTGAAGGCGCAAAGACAGAGTATCAAGAAAAGGCCTCAACTCAAGTGTTGATAGCTTTAGACAGACACCAAAACCGGGACACTTATGTTGTGGCCTTCAGAGGAACAGAACCCTTCAACGCCGACGATTGGTGCACGGACATCGACATCTCATGGTACGGAATCCCCGGCGTGGGAAGAATGCACGGCGGCTTCATGAAAGCATTAGGGCTACAAAAGAATGTGGGGTGGCCAAAGGAAATCGAAAGAGACGAGCGTCTTCCACCATTAGCATATTATGTTATTAGGGACATTCTAAGAAAAAGGCTGAGTGAAAATGAGAATGCAAAGTTCATAGTAACGGGTCATAGTTTGGGAGGTGCACTTGCAATTTTGTTTGGGACAGTGTTGTTTTTGCATGAAGAGACGTTGTTGTTGGAGAGGCTTGAAGGGATCTACACGTTTGGGCAACCGAGAGTTGGAGATGAAGCATATGCAATGTATATGAAACAGAAATTGAAGGAACATTCGGTAAGGTATTGTAGATTTGTTTATTGCAATGATATAGTTCCGAGGTTACCGTACGATGATAAGGAAATGATGTTCAAGCACTTTGGGATATGCCTTTTCTTTGATTGGCGATATCAGCTCAAGGTTCTTGAAGAAGAACCGAACAAGAACTACTTCTCGCTATGGTGTGTGATACCCATGACAATGAATGCAATTTTGGAACTAATAAGGAGCTTTACTATTGCATACCAAAATGGACCTCACTACAAAGAAGGATGGCTTCTATTTGCTTTCAGGGTTATTGGGGTATTAATTCCAGGCTTACCTGCTCATGGTCCCCAAGATTATCTTAATTCCACACTTTTGGGACCAATAGAAAAACACTTAAAAGCAGACTGA 1590 0.444 MAAKTSDDCDKGFADSYMLLKHEDARFFDLLHVLTSRNMSRRRFVESHAEGEVDESFGHRWLIFISILAQKLLQLMAKPLAFFGICVELLINLIALNGGIFYIIFNFIRGNKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGVLGIALLCHVTSKEHLGLPNRDYVKTGVISYKIAAHVADLEKGHPHAQAWDDALSKARFEFRWMDHFALSLDPMTAMSFNDETLPSEGAKTEYQEKASTQVLIALDRHQNRDTYVVAFRGTEPFNADDWCTDIDISWYGIPGVGRMHGGFMKALGLQKNVGWPKEIERDERLPPLAYYVIRDILRKRLSENENAKFIVTGHSLGGALAILFGTVLFLHEETLLLERLEGIYTFGQPRVGDEAYAMYMKQKLKEHSVRYCRFVYCNDIVPRLPYDDKEMMFKHFGICLFFDWRYQLKVLEEEPNKNYFSLWCVIPMTMNAILELIRSFTIAYQNGPHYKEGWLLFAFRVIGVLIPGLPAHGPQDYLNSTLLGPIEKHLKAD 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01332 529 SUPERFAMILY alpha/beta-Hydrolases 247 441 IPR029058 -
Arst1g01332 529 Gene3D alpha/beta hydrolase 224 444 IPR029058 -
Arst1g01332 529 Pfam Radical SAM ThiC family 112 236 IPR002817 GO:0009228|GO:0051536
Arst1g01332 529 Gene3D - 197 223 - -
Arst1g01332 529 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 118 IPR044819 GO:0004806|GO:0006629
Arst1g01332 529 CDD Lipase_3 242 439 - -
Arst1g01332 529 Gene3D Radical SAM ThiC family, central domain 103 196 IPR038521 -
Arst1g01332 529 Pfam Lipase (class 3) 264 424 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01332 Arst-Chr1 13522373 13527695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01332 16 520 Acyl Lipid Metabolism Gene Families AT1G56630 42.197 1.31e-129 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst1g01332 Lipase_3 8.7e-39 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01332 - - adu:107480219 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01332 1 13522373 13527695 Arst1g01332 1 13522373 13527695 ECH