Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01328 ATGGCAGCATCGCAAGAAGGACGTGTTTCAAGCGAGGATCCTCTTTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTCGATATAGTGGAACCTTTAGAGTGTGTAGCCTCTGACGAGCCAAGCAAGGCCGCACAGTTGTCGGATGTTACAGATGTTGGAAGTGATGAGATGGAGCTTGGTGATGAGTTACCAGATCATGGTTGCTTACAAGAAGACGAGATACCAAGAGTTGGAATGCGGTTTGCTCAGTTACAGATGGCTCATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGATAAGATCACAAAGGCTCCCATTAACCAGGCTATACACTGTAATCGCGATGGGATCCGCGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTCTGCTCAAGGTTGACTTGACGCACTCTCACCCTTGTTCACCGAAAAAGGCAGTGCACTATCATGAGTATAGGCAGTTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGGCTGGGATTCGACCAAACAAGACATTCCTTGCTTTGTCAAATGAAGCTGGTGGCCCCTCTAACTTGGGATTCTCAGAGAAGGATGTAAGAAATTATATAACAGCAAGGCTCCGAAGTAGCAACGTGAATGCGGATGTCAGGGAGATGATGAGCTACTTTAGGAGAATGAAGGACATCAATCCGAACTTCTTTTACGCGGTGAAGTTGGACGATGAGTGTAAATTTAAGAGTGCAGTATGGGTTGATGCAAGGTGTAAGGCGTCGTATGAATACTATGGAGACGTCATGTCAGTTGATAGCACGTACAGTAAAAATAGGTACGTATTAGTTAAGTTGGTGTTTTTACCTTTTCTTGATAATACGAATTTTGATCGTGATTGGCATTTCTTACATCTGGTTGGTTTTTCTGGTAGGCATGGATTACCGTTTGTGTTGTTCGTTGGGGTCAACCACCATGGTAGGTCGACCCTCCTCGGTTGTGCTTTGTTGGGGAATGAAGAAATCGGAAGTTATGAGTGGGTTTTTGTCCAATGGGTGAAGTGCATGGGAACTGCTCCAAAGTGTATCATAACCGATCAATGTCGATCCCTTTACCGTGCGATCAAAAATACTTTACCCGACACACGCCACCGGTGGTGCATTTGGCATATTATGAATAAGCTACCTTCGAAGCTTGGGGGTTACCGCCGGTACGGAGCTTTGTATGGTGACCTAAACGACATTGTGTGGAACTCTCGGACGGAGGAGTCATTTGAAGATGATTGGGCTGATTTTATAGATGAGTACAACTTACATAACAACACATGGCTGTCAGATCTGTATGATGACCGACGCATGTGGGTCCCAATATACTTCAAGGGTGAATTTTGGACAGGAATGCGGAGTACGCAAAGGAGTGAGAGCATGCACGCATTCTACGGTGGATACTTACACAGTAAAACTAGCTTGGTCCAATTTGTTCATGAATATGACAATGTGCTTGGAGTCAAGGAGCAGAGGGAACTGGAGGATGATGCTGCAGACTCGAGGGGGGTTATCCCTTGTGCAACTACCTCGCCTATAGAGAAACAGTTTCAGCAAGAGTATACCACGAGCATTTTTAGGGATGTTCAAATTGAGTTTGTGAGGAAGGCTAACTGCAGAGTTTCTGCAGTTGATGAACAGGGTCCAGTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTACTCAACGATACTATTCTATGCGTTCCGTATGATGTTCACTTTGACCGTTCCACACAGGAGCTTCGTTGTGAGTGCAATCTTTTTGAGAGTTCAAGTGTGTTGTGCTGTCACTATCTTGCAGTTTTTCATTCGTATAAATTGTATAAAGTACCTACCTATTATATTCTCCCTCGATCGAGCAAGAACATAAAGTGCAAGCATACGTATGTCAAAAGTAGCCATGATGTCAGTCGGTCAGATGAGAGTCATGTTGCATTCAGGGGACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGCATTGCTGCATGTTGCTTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGAATGGCAGAGACTCAGACCAACATTGGCTCTCAGAGTTCGAATGATGTCGGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTTGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACATCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGATGTTTCTAGCCTGGATGTTCCCAAACAAGACGGTGGTTTCATGATTCATGTTAGTTTCAAGGTTCTAAGGCAGCTGTTGCAAAGGTCCACATGTATACAGTTTAATAAAGTTGTTTCTGATTTCTACACGCTTGACTATATAGTTTTTCGACTGGATGTTCATTTTAGTAAGGTATTGGATGTTCAGATTACCTATATTGTCGGATGGTTAGTGGTCACCAGTTTTGATAAGCACAAATATGGCAGCTTTACCAAACAACCTTTATAA 2697 0.4423 MAASQEGRVSSEDPLLCTSPSRNSLMEVDIVEPLECVASDEPSKAAQLSDVTDVGSDEMELGDELPDHGCLQEDEIPRVGMRFAQLQMAHDFYVTYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKDVQDWVLLKVDLTHSHPCSPKKAVHYHEYRQLTMHAKCVIEDNDEAGIRPNKTFLALSNEAGGPSNLGFSEKDVRNYITARLRSSNVNADVREMMSYFRRMKDINPNFFYAVKLDDECKFKSAVWVDARCKASYEYYGDVMSVDSTYSKNRYVLVKLVFLPFLDNTNFDRDWHFLHLVGFSGRHGLPFVLFVGVNHHGRSTLLGCALLGNEEIGSYEWVFVQWVKCMGTAPKCIITDQCRSLYRAIKNTLPDTRHRWCIWHIMNKLPSKLGGYRRYGALYGDLNDIVWNSRTEESFEDDWADFIDEYNLHNNTWLSDLYDDRRMWVPIYFKGEFWTGMRSTQRSESMHAFYGGYLHSKTSLVQFVHEYDNVLGVKEQRELEDDAADSRGVIPCATTSPIEKQFQQEYTTSIFRDVQIEFVRKANCRVSAVDEQGPVVCVKVEEEKLLNDTILCVPYDVHFDRSTQELRCECNLFESSSVLCCHYLAVFHSYKLYKVPTYYILPRSSKNIKCKHTYVKSSHDVSRSDESHVAFRGLCAHFYNVAQEFLGDDEETALLHVALEETRAKLATHRAKKRSERMAETQTNIGSQSSNDVGVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSHPVVRPHTFQDINHCDVSSLDVPKQDGGFMIHVSFKVLRQLLQRSTCIQFNKVVSDFYTLDYIVFRLDVHFSKVLDVQITYIVGWLVVTSFDKHKYGSFTKQPL 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01328 898 Pfam FAR1 DNA-binding domain 91 178 IPR004330 -
Arst1g01328 898 Pfam MULE transposase domain 342 424 IPR018289 -
Arst1g01328 898 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 716 IPR031052 GO:0006355
Arst1g01328 898 MobiDBLite consensus disorder prediction 1 22 - -
Arst1g01328 898 MobiDBLite consensus disorder prediction 728 797 - -
Arst1g01328 898 MobiDBLite consensus disorder prediction 740 756 - -
Arst1g01328 898 ProSiteProfiles Zinc finger SWIM-type profile. 615 651 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01328 Arst-Chr1 13383262 13388056 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst1g01328 FAR1 2.2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01328 - - ahf:112778726 1577.38