Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01307 ATGGTGGATAGGATGGTGAAGAAGGAGGTTGAACAACATGATGAACAAACTGTGACTCTGGGTTTCTATGGAGACGAGCAAGCTCAACGGAGGTTTTCTATAAACATGATGGTCACAAATGGCGAGGCACAAAAATTTGCAAGCTCTATGAAGGCTACAACAGCAGAAGCAACATCCTCTCGTGGTGAGGCTAAGTCATCTGCTGTAATTCGAGCAGAAGAGATCCGATCGAGTTTGCAAGGCGAATACCCGAGTTTTGTGAAGTCATTAGTGAGATCACATGTTGCTAGTTGTTTCTGGATGGGTCTGCCTGTGGCATTCTGTAAGAAGCACTTGGCAGATAAGGATACAACGATGACTTTGGAAGATGAATATGGCAAAGAATACAAGATGAAGTACATCGCATGCAAAACGGGATTGAGCGCAGGTTGGAGACAGTTTTCTGCTGTGCATAAGTTGCAGGAGGGTGACGTCTTGGTCTTCCAGTTAGTTGAACCTGCCAAGTTTAAGATTTATATAGTAAGAGCAGATAATTTAAGGGAAGTAGATGGGGCCCTTTCGCTCATGAATCTAGACAGTTATGCAAGACAAAAGCAGAGAGAGAAAGAAAACCCAGAGAATGATGCTTTAGATGCTAGTATTACAAAGAAGAAACCCGGAAAATCTGTTGCAATTGACGTCCAAAAGAAAAAGGCATCAAAGCCAGGACATAAATCTGTGCAACCGGCGCAATCCGAAAACGATAGCGAAGAAGCAGTTTCAGAAGTATTTGAAGGGTTTAGAACGCTTGACTTCAAAGATGTCAAAGGATTTGAAAACTTTAGCATCATAGTGGATGGTGTGGTATTAGATGCCGAGTTCTCTACCGAGGTTAGAAACAAATACTACAAACTATGTTATAGCCAACGTGCTTTTCTTCATGAGAACCTCACCAGGGGGTTGAACTATAAGCTAGTTGTTGGAATCATAACGGAGACTGTAAACATTGCGGACGCCATAAAAGTTAGCGTGCTAGCTACGCCACGATTCGACTTCTCGAATTGGGACAAAACCCTGCTTGCCTTTGAGCATATGGGCATGAATGTTGAGTTCTTGAGAGTGAAGTTGCGGCGATTGGTGAGCATTGCATATGAGACTGATGATGCCTTAGAAACTAGGAGATACTTCCAGTATAAAAATCAACACTCAAGAGCAGATGAGGAAATAAAGAATATGGAGTCCAAGCTGGAAGATTTGAAAGGAGCTTGTAAGGATTTTAGTGCTTACATTAAGAGTTTGAAGCAAAAAGCTGAAACTCATCAAAACAAGTTTCAGAAAGAGGTTGCTGCTCCTTGGTGA 1338 0.4223 MVDRMVKKEVEQHDEQTVTLGFYGDEQAQRRFSINMMVTNGEAQKFASSMKATTAEATSSRGEAKSSAVIRAEEIRSSLQGEYPSFVKSLVRSHVASCFWMGLPVAFCKKHLADKDTTMTLEDEYGKEYKMKYIACKTGLSAGWRQFSAVHKLQEGDVLVFQLVEPAKFKIYIVRADNLREVDGALSLMNLDSYARQKQREKENPENDALDASITKKKPGKSVAIDVQKKKASKPGHKSVQPAQSENDSEEAVSEVFEGFRTLDFKDVKGFENFSIIVDGVVLDAEFSTEVRNKYYKLCYSQRAFLHENLTRGLNYKLVVGIITETVNIADAIKVSVLATPRFDFSNWDKTLLAFEHMGMNVEFLRVKLRRLVSIAYETDDALETRRYFQYKNQHSRADEEIKNMESKLEDLKGACKDFSAYIKSLKQKAETHQNKFQKEVAAPW 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01307 445 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 39 178 IPR044837 -
Arst1g01307 445 Gene3D - 63 179 IPR015300 -
Arst1g01307 445 Coils Coil 388 415 - -
Arst1g01307 445 MobiDBLite consensus disorder prediction 196 215 - -
Arst1g01307 445 Pfam B3 DNA binding domain 86 175 IPR003340 GO:0003677
Arst1g01307 445 SUPERFAMILY DNA-binding pseudobarrel domain 79 177 IPR015300 -
Arst1g01307 445 ProSiteProfiles B3 DNA-binding domain profile. 86 177 IPR003340 GO:0003677
Arst1g01307 445 CDD B3_DNA 84 175 IPR003340 GO:0003677
Arst1g01307 445 SMART B3_2 86 177 IPR003340 GO:0003677
Arst1g01307 445 MobiDBLite consensus disorder prediction 196 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01307 Arst-Chr1 13124951 13128249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01307 63 218 B3 DNA Binding Superfamily AT3G19184 39.490 4.19e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst1g01307 B3 5.3e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01307 - - adu:107479414 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01307 1 13124951 13128249 Arst1g01307 1 13124951 13128249 ECH