Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01281 ATGTCAGAGCAGGAGGAATCGTTCTCTGGTGCCTCGGCAATTGATGAGGCAGCAAATGAAGAGATAAAGAAGGAAGCAGGAAAGAGTAGAAAGGAACAGAGGGTTCCTTTACACAAGCTCTTCTCGTTTGCTGACTTCTATGATTGTGTCTTGATGGCTATTGGATCCATTGGGGCATGTGTTCATGGTGCCTCTGTGCCTGTCTTCTTTATTTTCTTTGGAAAGATGATCAATGTGGCTGGCTTAGCTTACCTTTATCCCAAAGAAACTTCCCATCGAGTTGCCAAGTACTCATTGGATTTTGTGTATCTAAGTATAGTAATACTGTTTGCGTCTTGGACAGAGGTTGCTTGTTGGATGCACACGGGCGAACGTCAGGCAGCGAAGATGAGGATGGCTTATTTAAGATCAATGCTGAATCAAGATATTACTTTATTTGATACAGATGCATCAACCGGAGATGTTATATCTGCCATTACAAGTGACATTATTGTTGTCCAAGATGCACTATCCGAGAAGGTAGGAAATTTGATGCATTACATAAGCAGATTTGCAGCGGGGTTTGCCATTGGATTTGTGAAAGTGTGGCAGATCAGTTTAGTGACACTTGGAATTGTACCCTTAATTGCACTTGCTGGAGGTGCTTATGCATATGTCACATTTGGGCTAGTTGCCAGAGTTCGCAAAGCCTATGTAAAGGCTGGTGGGATCGCTCAAGAGGTGATAGCCAATGTGAGAACAGTACAAGCATTTTCAGGAGAAGAAAGGGCAGTGAGATCATACAGAGCGGCTCTCATCAACACCTATAGAAATGGCTATAAAGCAGGTTTGGCAAAGGGTCTGGGACTAGGCTCCATGCATTGCGTCCTTTTCCTCTCCTGGGCTCTGCTTGTTTGGTTCACTAGCATCGTTGTTCACAAGAATATTGCCAATGGCGGCGTCTCTTTCACTACGATGCTCAACGTTGTTATCTCTAGCCTATCACTTGGGCAGGCAGCACCAGATATTTCTGCTTTTGTCCGAGCAAGGGCAGCTGCTTATCCCATCTTTGAGATGATAGAAAGAGACACAGTGAACAAGACCAGCTCCAAGTTTGGTCAAAGATTGAGCAAATTGGAGGGTAACATCCAATTTAAGGATGTATGTTTCAGTTATCCTTCTCGTCCTGATGTACCCATCTTCAACAACCTCTGTCTTGAGATTCCTTCTGGCAAAATTGTAGCCCTTGTGGGAGGAAGTGGCTCCGGAAAGAGCACTATAATATCGTTGATTGAGCGCTTCTATGAACCACTTTCTGGTCAAATACTACTAGACGGGCACGATATTAGGGGACTTGATCTCAGATGGCTTAGACAGCAAATTGGGCTAGTTAATCAAGAACCTGCACTATTTGCTACAAGCATCAAGGATAACATACTGTATGGAAAAGATGATGCAACGCTTGCTGAAATAAATTATGCGGTGACGCTATCAGATGCTCAGACTTTCATTAACAATCTTCCGGATGGATTAGATACAAAGGTTGGTGAAAGAGGGATTCAACTATCAGGTGGACAGAAGCAAAGGATTGCAATATCTCGAGCTATTGTCAAGAATCCATCAATACTTTTATTAGATGAAGCAACGAGCGCTCTGGATGCGGAGTCAGAGAAGAGTGTACAGGAGGCACTTGATCGAGTGATGGTTGGTAGAACAACCGTGATAGTGGCACATAGGCTTTCTACCATTAAGAATGCAGATATTATCGCGGTTGTTCAGCAAGGAAAGATTGTGGAAACTGGCAACCACGAGGAGCTCATTTCTAACCCAAATGGTGTATATGCATCTCTTGTTGAAATCCAGGAGTCAGCCTCTTTGCAACACCACCCTCGTGTGGATTCTAGCATGGGACAAACATCCAGCGTTTCCCGTACAACAAGCTTTGGTGGTAGTTTTCATTCGGATAAAGAATCTGTTGCCTATTTTGGTTCTAATGAAGGAGAAAGTAGTATTAGAAACAACTCAAGCCATGTCTCGATAAGGAGACTATATTCCATGGTTGGTCCTGACTGGTATTATGGAGTTTTTGGAACCTTGGGTGCATTTATTGCTGGTGCCCTGATGCCACTTTTTGCTCTCGGAATAACTCATGCACTTGTAGCATACTACATGGACTGGAATGCAACGCGTCGTGAAATTAGGAAAATAGCTTTCCTCTTCTGCGGGGCAGCAATTTTAGCCGTTACTGCTTATACCATCGAACATCTGTCTTTCGGAATCATGGGCGAGCGGCTTACCCTTCGTGTCAGAGAAACAATGTTTTCTGCTGTTTTGAAAAATGAAATTGCCTGGTTTGATGATACTAGCAACACAAGTTCTATGCTTTCATCACGTTTAGAGGCTGATGCGACTTTATTAAGAACTATTGTTGTTGATCGATCTACAATTCTCTTTCAGAATGTTGGTCTGATTGTTACTTCATTTATTATTGCCTTCATTTTGAACTGGAGGGTTACGCTTGTTGTCTTGGCTACATATCCTTTGATCGTCAGTGGTCACATCAGTGAGAAACTTTTTATGAAAGGCTTTGGTGGAAACCTGAGCAAAGCATATCTAAAAGCCAACATGTTGGCGGGGGAGGCTGTGAGTAATATCCGTACTGTTGCAGCATTTTGTTGTGAAGAAAAAGTCATCCACCTTTATGCTCAAGAGCTTGTTGAACCATCCAAGCGTTCATTCAAACGAGGCCAAATTGCTGGCATATTCTATGGCATATCCCAGTTCTTTATTTTCTCTTCTTATGGCCTTGCCTTATGGTACGGATCAGTTTTGATGCAGAAGGAGCTTTCTAGCTTTAAATCAGTTATGAAGTCGTTCATGGTTTTGATCGTAACCGCACTGGCCATGGGGGAGACTTTGGCATTGGCACCAGATATGCTAAAAGGAAATCAAATGGCTGCATCAGTATTTGAAGTGATGGATAGAAGGACAGGAATAAAGGGAGATGTGGGAGAAGAGTTGCATACAGTGGAAGGAACAATTGAGCTAAAAAATATCCATTTCCGATACCCTTCAAGGCCAGATGTGGTTGTTTTTAATGATTTCAATATGAGAGTTCCTTCAGGGAAGACTGTTGCCTTGGTGGGGCACAGTGGTTCCGGGAAAAGCTCCGTCATCTCTCTTATACTCAGATTTTATGATCCAACATCTGGAAGGGTGATGATTGATGGAAAAGACATAAGGAATCTTAATTTAAAATCTGTTAGGAAACACATTGGTTTTGTGCAACAAGAACCGGTACTTTTTGCAACATCTATTTATGAGAATATTCTTTATGGAAAGGAAGAAGCGTCCAATTCAGAAGTAGTTGAAGCAGCTAAGCTTGCAAATGCTCATAACTTCATAAGTGGTCTTCCTGAGGGATACTCCACCAAAGTAGGGGAAAGAGGAGCTCAACTATCTGGTGGTCAGAGACAAAGGATAGCTATTGCGAGGGCCATATTGAAGAATCCTGCAATCTTGTTGCTGGATGAAGCCACGAGCGCACTAGATGTGGAGTCAGAACGTGTAGTACAACAAGCTCTAGACAAATTGATGAACAACAGAACAACAATTGTGGTGGCTCATAGGCTATCCACAATAAGAAATGCATATCAAATCTCTGTTGTCGACGATGGAAAAATAGTTGAGCAAGGGACTCATTCGAGTCTGATACAGAACAAGAGTGGAGCATATTATAAATTAGTTAGCCTTCAACAACAACATCAACATTTACATGAGCAACAAAACTAG 3771 0.4248 MSEQEESFSGASAIDEAANEEIKKEAGKSRKEQRVPLHKLFSFADFYDCVLMAIGSIGACVHGASVPVFFIFFGKMINVAGLAYLYPKETSHRVAKYSLDFVYLSIVILFASWTEVACWMHTGERQAAKMRMAYLRSMLNQDITLFDTDASTGDVISAITSDIIVVQDALSEKVGNLMHYISRFAAGFAIGFVKVWQISLVTLGIVPLIALAGGAYAYVTFGLVARVRKAYVKAGGIAQEVIANVRTVQAFSGEERAVRSYRAALINTYRNGYKAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKNIANGGVSFTTMLNVVISSLSLGQAAPDISAFVRARAAAYPIFEMIERDTVNKTSSKFGQRLSKLEGNIQFKDVCFSYPSRPDVPIFNNLCLEIPSGKIVALVGGSGSGKSTIISLIERFYEPLSGQILLDGHDIRGLDLRWLRQQIGLVNQEPALFATSIKDNILYGKDDATLAEINYAVTLSDAQTFINNLPDGLDTKVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIKNADIIAVVQQGKIVETGNHEELISNPNGVYASLVEIQESASLQHHPRVDSSMGQTSSVSRTTSFGGSFHSDKESVAYFGSNEGESSIRNNSSHVSIRRLYSMVGPDWYYGVFGTLGAFIAGALMPLFALGITHALVAYYMDWNATRREIRKIAFLFCGAAILAVTAYTIEHLSFGIMGERLTLRVRETMFSAVLKNEIAWFDDTSNTSSMLSSRLEADATLLRTIVVDRSTILFQNVGLIVTSFIIAFILNWRVTLVVLATYPLIVSGHISEKLFMKGFGGNLSKAYLKANMLAGEAVSNIRTVAAFCCEEKVIHLYAQELVEPSKRSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMQKELSSFKSVMKSFMVLIVTALAMGETLALAPDMLKGNQMAASVFEVMDRRTGIKGDVGEELHTVEGTIELKNIHFRYPSRPDVVVFNDFNMRVPSGKTVALVGHSGSGKSSVISLILRFYDPTSGRVMIDGKDIRNLNLKSVRKHIGFVQQEPVLFATSIYENILYGKEEASNSEVVEAAKLANAHNFISGLPEGYSTKVGERGAQLSGGQRQRIAIARAILKNPAILLLDEATSALDVESERVVQQALDKLMNNRTTIVVAHRLSTIRNAYQISVVDDGKIVEQGTHSSLIQNKSGAYYKLVSLQQQHQHLHEQQN 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01281 1256 Pfam ABC transporter transmembrane region 689 960 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g01281 1256 Pfam ABC transporter transmembrane region 54 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g01281 1256 MobiDBLite consensus disorder prediction 1 20 - -
Arst1g01281 1256 CDD ABC_MTABC3_MDL1_MDL2 1007 1242 - -
Arst1g01281 1256 FunFam ABC transporter B family member 1 366 615 - -
Arst1g01281 1256 PANTHER ABC TRANSPORTER B FAMILY 15 616 IPR039421 -
Arst1g01281 1256 PANTHER ABC TRANSPORTER B FAMILY 15 616 IPR039421 -
Arst1g01281 1256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 612 IPR003439 GO:0005524
Arst1g01281 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1000 1245 IPR027417 -
Arst1g01281 1256 ProSitePatterns ABC transporters family signature. 1146 1160 IPR017871 GO:0005524|GO:0016887
Arst1g01281 1256 Gene3D ABC transporter type 1, transmembrane domain 39 976 IPR036640 GO:0005524|GO:0016020
Arst1g01281 1256 Pfam ABC transporter 395 543 IPR003439 GO:0005524
Arst1g01281 1256 FunFam ABC transporter B family member 4 997 1252 - -
Arst1g01281 1256 SUPERFAMILY ABC transporter transmembrane region 674 987 IPR036640 GO:0005524|GO:0016020
Arst1g01281 1256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1007 1243 IPR003439 GO:0005524
Arst1g01281 1256 SUPERFAMILY ABC transporter transmembrane region 40 347 IPR036640 GO:0005524|GO:0016020
Arst1g01281 1256 SMART AAA_5 403 595 IPR003593 GO:0016887
Arst1g01281 1256 SMART AAA_5 1034 1206 IPR003593 GO:0016887
Arst1g01281 1256 Pfam ABC transporter 1026 1174 IPR003439 GO:0005524
Arst1g01281 1256 CDD ABC_6TM_Pgp_ABCB1_D1_like 52 349 - -
Arst1g01281 1256 Gene3D - 1005 1253 IPR027417 -
Arst1g01281 1256 Gene3D - 1005 1253 IPR027417 -
Arst1g01281 1256 CDD ABC_6TM_Pgp_ABCB1_D2_like 677 992 - -
Arst1g01281 1256 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524|GO:0016887
Arst1g01281 1256 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 53 341 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g01281 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 614 IPR027417 -
Arst1g01281 1256 Gene3D ABC transporter type 1, transmembrane domain 977 1004 IPR036640 GO:0005524|GO:0016020
Arst1g01281 1256 Gene3D ABC transporter type 1, transmembrane domain 977 1004 IPR036640 GO:0005524|GO:0016020
Arst1g01281 1256 Gene3D - 366 615 IPR027417 -
Arst1g01281 1256 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 974 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g01281 1256 CDD ABC_MTABC3_MDL1_MDL2 376 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01281 Arst-Chr1 12599266 12604976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01281 25 1246 Calmodulin-binding Proteins AT2G36910 50.440 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01281 K05658 - gmx:100809752 1983.38