Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01276 ATGTCATCATCGGAGGCGGGCTACAAAACGCCCGACGGAGAATACAATACCCCCCCGGCGTTAATAGCATTCACGTTAGCCGTCCTAGTGTTATGCTTCATGGCCTTCAGCGTTGTGTACTTGTGCAAGTACTGCTTTGTAAGCGTCCTCCACTCTTGGGCCTTCCACCAGAGTTTCTCTGGTTCATTGCTTCGTCCTTCATCAACAAATAGGTCTTCCTCAATAGGCCTTGATCCTTCCATGCTTCAAACGTTCCCAACCTTTGTGTATTCCTCCGTAAAGGACCTCCGCAGCCTAGAATGTGCCATTTGCTTGCTCGAATTCCAGGACGACAGCTTGATTCGCCTCTTGACTATTTGCTGCCATGTTTTCCACCAAGAATGCATTGACCTTTGGCTTTATTCCCACAAGACTTGCCCTGTTTGCCGCACAAACCTCGAGGAGCATAAATCAGGAGAAGGAGAAATCAGTGGTAGCAGTGGTGGTGCTGACATACGCATTGACATAATAACAGACATGGCCACCCAAGGTAGTGGGGGTCATCAGGGTACAGGAGGAGAGGATCATTCGTGTAATGACGAACATGATCATAATAATAATGGGGTGCAGCAAGAACACAAGTTTGCAAGGTCACACTCAACGGGCCATTCCATAGTTTTTAGAGGAGAAGAAGAAGAAAAAGATGATAAATATACCTTGAGGCTGCCTCAACACATTATAAGAGGGCGGCACCACTATTCTAAGAGTTGTACAAGTTTTCAAGAGATGCAGATGACGACTTCGACTAGGCCTTGTAGTAATTGCGGCTTTGTTGAATCTGTATCTAGCTGCTCCACCTCTCTCGCTCATATCCAAATTTCTTGA 864 0.4653 MSSSEAGYKTPDGEYNTPPALIAFTLAVLVLCFMAFSVVYLCKYCFVSVLHSWAFHQSFSGSLLRPSSTNRSSSIGLDPSMLQTFPTFVYSSVKDLRSLECAICLLEFQDDSLIRLLTICCHVFHQECIDLWLYSHKTCPVCRTNLEEHKSGEGEISGSSGGADIRIDIITDMATQGSGGHQGTGGEDHSCNDEHDHNNNGVQQEHKFARSHSTGHSIVFRGEEEEKDDKYTLRLPQHIIRGRHHYSKSCTSFQEMQMTTSTRPCSNCGFVESVSSCSTSLAHIQIS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01276 287 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Arst1g01276 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 149 IPR013083 -
Arst1g01276 287 PANTHER RING FINGER DOMAIN-CONTAINING 14 147 - -
Arst1g01276 287 SMART ring_2 101 142 IPR001841 -
Arst1g01276 287 FunFam E3 ubiquitin-protein ligase ATL6 65 149 - -
Arst1g01276 287 SUPERFAMILY RING/U-box 81 149 - -
Arst1g01276 287 Pfam Ring finger domain 100 143 IPR001841 -
Arst1g01276 287 MobiDBLite consensus disorder prediction 176 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01276 Arst-Chr1 12597675 12598620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01276 19 249 Rapid Response to Elicitors AT2G35000 32.245 2.77e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01276 - - adu:107479180 572.778