Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01261 ATGGGAAGAGCTCCTTGTTGTGACAAAGCAAATGTGAAGAGAGGACCATGGTCTCCTGATGAGGATGCAACACTCAAGAACTATCTTCACACTCATGGCACTGGAGGAAATTGGATTGCATTGCCAAGAAAAGCTGGTTTAAGGAGGTGTGGGAAGAGTTGCCGTCTAAGGTGGCTGAATTATCTAAGGCCAGATATAAAACATGGAGGATTTACCGAACAAGAGGATCAAATCATTTGCACTCTCTATACTCAAATGGGAAGCAGATGGTCTGCAATAGCATCTCAACTTCCTGGCAGAACAGATAATGATGTCAAAAACTATTGGAACACCAAGCTCAAGAAGAAGCTCATGGCAGCAAAAGTTCAACTTCTTCTTCATCACTTGCATTATTGGACTACAAGGGTGGATCATCACTTCTAG 423 0.4279 MGRAPCCDKANVKRGPWSPDEDATLKNYLHTHGTGGNWIALPRKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEQEDQIICTLYTQMGSRWSAIASQLPGRTDNDVKNYWNTKLKKKLMAAKVQLLLHHLHYWTTRVDHHF 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01261 140 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Arst1g01261 140 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Arst1g01261 140 PANTHER OS09G0431300 PROTEIN 1 121 - -
Arst1g01261 140 Gene3D - 7 68 - -
Arst1g01261 140 SMART sant 13 64 IPR001005 -
Arst1g01261 140 SMART sant 67 115 IPR001005 -
Arst1g01261 140 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Arst1g01261 140 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Arst1g01261 140 CDD SANT 71 111 IPR001005 -
Arst1g01261 140 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Arst1g01261 140 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Arst1g01261 140 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Arst1g01261 140 CDD SANT 16 62 IPR001005 -
Arst1g01261 140 FunFam Transcription factor RAX3 7 68 - -
Arst1g01261 140 FunFam Transcription factor RAX3 70 139 - -
Arst1g01261 140 Gene3D - 70 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01261 Arst-Chr1 12445069 12447849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01261 1 118 MYB Transcription Factor Family AT5G65790 80.508 1.18e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst1g01261 Myb_DNA-binding 2.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01261 K09422 - gmx:100789985 252.292