Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01212 ATGGGGTGGGGCAACACTAACAACAATGAGATATGGAAGGCCCATGGGGCCATGGCCATGGTTCAGCTCTTCAGCGGTGGCTATCACGTAATTACCAAATTAGCCCTCAACGTTGGCGTCAACCAGATCGTCTTCTGCGTCTTCCGCGATCTCCTCGCCCTCTCCATCCTCGCCCCTCTCGCCTTCTTCCGTGAAAGACGCACGCGCCCTCCCCTCACCAAGCACCTCCTCTTCTCCTTCTTCTTTCTTGGATTAACCGGGATATTTGGGAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCAATACAGCCAGCCACTCCGGTTTTTACATTTCTCTTCGCTGTAATCATGGGCACAGAAAGAGTGAATTTGCTAAGATATGAGGGTTTGGCCAAGCTTGGTGGAACTCTTGTCTGTGTTTTTGGTGCTATTTTGATGGTTTTGTACCGGGGTCCGGCTGTCGTAGGGTATGCCGAAATGGACTTTGTTTCGCATAATGAAATCAGTGCTAAAGGTCAACCAGAGCCTTCTGGATGGTTGGTTACCGGTTTAATGGATCTTGGACTCGACCATTTTCATCTTGGGGTTCTGTGTTTCATAGGGAACACCTTGTGCATGGCTGCTTTTCTTGCCATTCAGGCACCAATACTAAAAAAATATCCTGCAAACTTATCTGTCATTGCATTTTCATACTTCTTTGGAGCTCTACTAATGGTGATCACATCAATGTTCGTGACAAATGAGGCGACCGACTGGATTTTGACGCAGTCCGAGACACTTGCTGTTATTTATGCTGGTGTTATCGCATCTGCCCTTAACTATGGACTGATTACATGGTGCAACAAGATATTAGGGCCAGCAATGGTTGCTCTTTATAATCCACTTCAACCTGGTGCTTCTGCTCTCTTGTCTAGAATTTTCCTTGGAAGTCCAATTTACATGGGAAGCATTCTTGGAGGTTCTTTGATTATTACTGGTTTGTATGCTGTTACATGGGCATCATTTAGAGAAAGACAAGCATCAAGTGGAGTTCTTCCTCATCATCATCATCATCATGGATCTTGGGTCTCTGATGACAAGAGTTCATATCAGAGAGGTCTCATCCTCCCCAGCTTAACCCCAAAGCCTTCTGATTAA 1161 0.4539 MGWGNTNNNEIWKAHGAMAMVQLFSGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPLAFFRERRTRPPLTKHLLFSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLFAVIMGTERVNLLRYEGLAKLGGTLVCVFGAILMVLYRGPAVVGYAEMDFVSHNEISAKGQPEPSGWLVTGLMDLGLDHFHLGVLCFIGNTLCMAAFLAIQAPILKKYPANLSVIAFSYFFGALLMVITSMFVTNEATDWILTQSETLAVIYAGVIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSILGGSLIITGLYAVTWASFRERQASSGVLPHHHHHHGSWVSDDKSSYQRGLILPSLTPKPSD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01212 386 Pfam EamA-like transporter family 202 339 IPR000620 GO:0016020
Arst1g01212 386 Pfam EamA-like transporter family 20 138 IPR000620 GO:0016020
Arst1g01212 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Arst1g01212 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 345 - -
Arst1g01212 386 PANTHER WAT1-RELATED PROTEIN 16 346 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01212 Arst-Chr1 11973250 11975847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01212 97 350 Nodulin-like Gene Family AT5G45370 66.535 4.27e-120 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01212 - - gmx:100809051 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01212 1 11973250 11975847 Arst1g01212 1 11973250 11975847 ECH
Arst5g00350 5 2961993 2964603 Arst1g01212 1 11973250 11975847 PCT