Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01200 ATGCACTTGGTGTTGCGCCACACCATGACGCTTCCTACTGATTCGGAACCACCACCACCTTCTCCTCCTCCACCGGATTCCGCCACCGACACCGCCACCGCAACCGCCGCAGCAAACGGAGCAACCACCACCACCACCACCTCCTCCTCATCATCCGAAAATCCACCGGATTCCCTGCCTACACCGCCGCAAGAGCTCCAACTCCCAATTTCATGGCCGCAAGACGGAACCTTGAGCCTCGAATGGATCCACAATCTGATGCAGTGCTTCGATTGGTCTTCGAGGAACTTTCCTCCTTCCGAGTTCCCTTCCGTTCTTCCCGTTCAGGTATTCGACTCTCTCATCCTCGTTGCTTCCAAGATGCTCCATAAGGAACCCAATTGCGTCACCGTTGATCCGTTTCGCCCTAATTCCGGCACGACGGCGTCGGTGGTGGTCGTTGGTGACGTTCACGGGCAGCTGCATGATCTGCTTTTTCTCCTCAAAGACGCAGGTTACCCTTCCGATGATCGAATCTTCGTCTTCAATGGTGATTACGTTGATCGTGGAGCTTGGGGGCTCGAAACTTTCGTGCTCTTGTTAGCTTGGAAGGTGTTTATGCCTCATAATGTATATCTGCTACGTGGGAATCACGAATCAAAATACTGCACATCGGTCTATGGTTATGAGAAGGAAGTGATGGCAAAGTATGGTGATAAAGGTAAGCATGTGTATCGCAAATGCTTGGGATGCTTTGAGGGTCTTCCTTTGGCTTCCATTGTAGCAGGGTGTGTATTCACAGCTCATGGAGGACTCTTCCGCAGTGTAACAGTGACGCCATCAAAGAGATTAAAAGGGAAGAAGAACAGAAAGATTCTTCTTAATCATGATAACAAAACTCTAACTCTTGGTTCCTTGGAAGAATTGTCTAAGGCCCGACGGTCAGTTCTTGATCCTCCTTGGGAAGGCCCAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCGAAAAATCCTGGTCTTGCCCCGAACAAAGAAAGAGGCATTGGCTTGTTGTGGGGTCCCGATTGTACTGAAGAATTTTTGAAGAAGTATCAATTAAAGCTGGTCATCAGGTCTCATGAAGGTCCTGATGCTAGGGAAAAGAGGGATGGTTTAGATAGAATGTCTGAAGGTTACACTATTGATCATGTTGTGGATTCTGGGAAACTGATCACCCTCTTTAGTGCTCCAGATTACCCGCAATTTCAGGCAACAGAGGAGAGGTATAACAACAAAGGAGCCTATGTTGTTCTTGAACCCCCAAATTTTGACAATGCCATATTTCATGGATTTACAGCAGTTACTCCAAGGCCAAAGGTGAATGCCTATTATAATTTTGAAGAGGTGATAGATTCTGACGAAGAGTTGGACTTGGAGTCTATGGTGACTTCTTGA 1419 0.4771 MHLVLRHTMTLPTDSEPPPPSPPPPDSATDTATATAAANGATTTTTTSSSSSENPPDSLPTPPQELQLPISWPQDGTLSLEWIHNLMQCFDWSSRNFPPSEFPSVLPVQVFDSLILVASKMLHKEPNCVTVDPFRPNSGTTASVVVVGDVHGQLHDLLFLLKDAGYPSDDRIFVFNGDYVDRGAWGLETFVLLLAWKVFMPHNVYLLRGNHESKYCTSVYGYEKEVMAKYGDKGKHVYRKCLGCFEGLPLASIVAGCVFTAHGGLFRSVTVTPSKRLKGKKNRKILLNHDNKTLTLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLLWGPDCTEEFLKKYQLKLVIRSHEGPDAREKRDGLDRMSEGYTIDHVVDSGKLITLFSAPDYPQFQATEERYNNKGAYVVLEPPNFDNAIFHGFTAVTPRPKVNAYYNFEEVIDSDEELDLESMVTS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01200 472 CDD MPP_PP7 72 453 IPR041754 -
Arst1g01200 472 SMART pp2a_7 106 446 IPR006186 GO:0016787
Arst1g01200 472 MobiDBLite consensus disorder prediction 13 27 - -
Arst1g01200 472 FunFam Serine/threonine-protein phosphatase 90 467 - -
Arst1g01200 472 MobiDBLite consensus disorder prediction 28 55 - -
Arst1g01200 472 ProSitePatterns Serine/threonine specific protein phosphatases signature. 207 212 IPR006186 GO:0016787
Arst1g01200 472 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 49 470 - -
Arst1g01200 472 Gene3D - 101 465 IPR029052 -
Arst1g01200 472 MobiDBLite consensus disorder prediction 1 71 - -
Arst1g01200 472 Pfam Calcineurin-like phosphoesterase 143 371 IPR004843 GO:0016787
Arst1g01200 472 SUPERFAMILY Metallo-dependent phosphatases 103 442 IPR029052 -
Arst1g01200 472 PRINTS Serine/threonine phosphatase family signature 173 200 IPR006186 GO:0016787
Arst1g01200 472 PRINTS Serine/threonine phosphatase family signature 303 330 IPR006186 GO:0016787
Arst1g01200 472 PRINTS Serine/threonine phosphatase family signature 243 269 IPR006186 GO:0016787
Arst1g01200 472 PRINTS Serine/threonine phosphatase family signature 143 170 IPR006186 GO:0016787
Arst1g01200 472 PRINTS Serine/threonine phosphatase family signature 397 413 IPR006186 GO:0016787
Arst1g01200 472 PRINTS Serine/threonine phosphatase family signature 206 230 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01200 Arst-Chr1 11709909 11713423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01200 69 363 Calmodulin-binding Proteins AT5G63870 69.932 1.74e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01200 K04460 - gmx:100810695 775.007