Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01181 ATGACTCGCATGCTAAGAATCCTCCAATCCGCCACCGCCAACAACGCCACCACTACCACCGCCATAGCTGCTGCCGTGCCACCGGCCGAGGCAGCCTCAGTCGAGTCCGACTTCGTCGTCATCCTCGCTGCGCTGCTCTGCGCACTCATCTGCGTCGTCGGCCTCATCGCCGTCGCACGATGCGCCTGGCTCCGCCGCGTCCCCGTCGCAGGCACCGGAGCATCTCCACATCAGGCACTCGCCAACCGTGGACTCAAGAAGAAGGTACTCAACTCGTTACCAAAATTCACCTACGTCGACGGCGACGGCGCCGGTGCCGGTAACGGTGCTGACGCCGGCGTCCGGAGGAAGTGGACAGCCTCATCGGAATGCTCAATTTGTCTGGCGGAATTCGCCGCCGGCGACGAGGTCAGGGTGCTTCCGCAGTGTGGCCATGGCTTCCACGTGGCATGTATTGACACGTGGCTGGGATCACACTCCTCCTGCCCGTCCTGCCGCGCCGTCCTGGCCGTTGGGAGATGCCAAAAATGCGGCCAGTTTCCGGCCGTTCCAAACGGCGCTACCGTAGTAGCAATTGCCGGCGAAACAGAATTAAAATCTGTCGTCGGCAACAGCAATGGTAACGCCGGAAGTAATAGCCGGCATGCTAGCAATGATTTCTTGCCTTAA 669 0.6084 MTRMLRILQSATANNATTTTAIAAAVPPAEAASVESDFVVILAALLCALICVVGLIAVARCAWLRRVPVAGTGASPHQALANRGLKKKVLNSLPKFTYVDGDGAGAGNGADAGVRRKWTASSECSICLAEFAAGDEVRVLPQCGHGFHVACIDTWLGSHSSCPSCRAVLAVGRCQKCGQFPAVPNGATVVAIAGETELKSVVGNSNGNAGSNSRHASNDFLP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01181 222 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 28 178 - -
Arst1g01181 222 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
Arst1g01181 222 SUPERFAMILY RING/U-box 123 170 - -
Arst1g01181 222 CDD RING-H2_EL5-like 123 166 - -
Arst1g01181 222 SMART FANCL_C_2 120 174 - -
Arst1g01181 222 SMART ring_2 124 165 IPR001841 -
Arst1g01181 222 MobiDBLite consensus disorder prediction 203 222 - -
Arst1g01181 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 171 IPR013083 -
Arst1g01181 222 Pfam Ring finger domain 123 166 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01181 Arst-Chr1 11612120 11613240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01181 1 177 C3H Transcription Factor Family AT1G76410 55.801 7.69e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01181 - - pcin:129322223 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00393 5 3392222 3393383 Arst1g01181 1 11612120 11613240 PCT