Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01177 ATGACTGGTCACTGTACATGCATGATAAACACTTTGAAAATCTCAGAATCAATTGCAGAATATGTTGCTCGTACACCTACCTTTTCAGATGATGGAGCAGTTACACTTGGATCCAAGAGAAGCACTTTGTTTGAAGTTGATGCTAAAACCGGAAGGATCGTTCAAATCCATAGTATGTCTGATTCTGATAATTCTTCTACATCTTGGAGTGATGACAAGAAGAGTGATACAGATATCCTTATAACAAAGAAAAAGGATCTTGCTAATCCTACGGAGCTGAATTCGCCGGAGTTGCTACTCAAGATATTTAGGACAGATTATTCTCTTCGATCTGTTGGTCCTAGTTCAGGAGTAGTTTTGTGGACTATGACTGTATCCGAATTCGAGGCTGTATTATTATGCCAACATACTTCATTTGATGCCGATGATGAGTATGTTTCTGTCGGTGAGCTTGGTTTTGCGATGCCATATCCATGTCAAGAGATCCAACCAGTCTTTCGCTTGCGTAAGAATTTTATACTAGAACCCTCAATCACTGAAAGGTTACCTGGTTCTGATCATGAAAACAATATGCTTTTGATGCCTGCGTCGGATTTGATGCTTCCTTCACAAGCAAATTTTGAAAAATTAAATATCGATGATGGTAATATGATGCTTCCTTTGCCAATACCAAATTCTTTGCCTTCCCCGAAACCAAAAATTGTCTATCCAAGCCGAATGCATGAATGGTCAACACCATTACGTTTTATGATGCTTATGGTTTTGGGCTTTGTCCTCTATACTCTAGTGGTTAAAAGTAAAGATACGCCAAAGGATCAAAACCAGTCTGAATCGAAAATTTTGCCTGCTAAGAAAAAGAAGACACGAAAGTCAGCAAAGAACAATGTAGCAGTTGACAAAAAGGAAAAACATCTGTCCTCCGAAGATGAGGATGTGCTGATGCGAAAGGATCTCGACATAGAAGCAGGCAGGTGGATGCAATTTAACCAAATTGACCAAGGTGTTGACGGACGCAGGGTTGGTAAACTGCTTGTGTCAAATAAAGAAATTGCTAAGGGAAGCAATGGCACCATTGTCTTTGAGGGAATATATGAAGGTCGGGCAGTTGCTGTCAAGCGTTTGGTCAAGACTCATCATGATGTAGCATACAAAGAAATCCAAAATCTGATTGTATCTGATCATCACCCAAACATTGTTCGATGGCATGGGGTAGAATATGATCAAGATTTTGTTTACCTTGCTCTGGAACGATGTACATGCAGCTTGGATGATTTTATTCAAATTTATTCGGATATATCAGATAACCCTCTGTTTAGGAAGAACCAAGCTTTCAAGTCTTCTATTGAGGCCCAAATTGATATGGGGAAGGATAATATGCATGGTCTGTGGAAAGCCAATGGCTATCCATCACCTCTATTACTGAAATTGATGAGAGATGTCGTTTCTGGGATTGTTCATTTGCATGAACTAGGAATAATACATCGTGATTTGAAACCCCAAAATGTTTTGATAATCAAGGAAAGATCCTTGTGCGCAAAGCTTTCTGATATGGGCATTAGCAAACGCCTCCCTGAAGATATGTCTGCTTTGGGTCATAATGCTACTGGAGCTGGCAGTTCAGGTTGGCAAGCACCAGAACAACTTGGTCAAGGACGCCAAACACGGGCCGTAGATTTATTTAGCTTAGGTTGTGTCCTCTTTTTCTGCATGACTGGGGGGAGGCATCCATTTGGAGAACGGCTTGAACGCGATGTTAATATTGTGAAAAACAGAATGGATCTTTTCTTAGTGGAGTTCATTCCTGAAGCAGAAGATCTAGTTTCTAGTTTATTGAACCCTAACCCTGATATAAGGCCAAAGGCAATTGAAGTATTGCACCATCCATTTTTTTGGAGTCCAGAAATGAGACTGTCATTTTTACGCGATGCCAGTGATAGAGTGGAACTAGAAGATAGGGAGACTAATTCTGTTCTTCTGAACGCATTAGAAAGCATTGCTACAGTCGCATTAGGTGCGAAATGGGACGAAAAGTTGGAACCAGCCTTTCTTACTAACATTGGTCGATATCGACGGTACAAGTATGATAGTGTTCGAGACTTGTTGCGCGTCATGAGGAACAAGCTAAATCATTATAGAGAGTTGCCTCAAGAAATCCAGGAACTTGTGGGAACTGTTCCGGAAGGATTCAATGAATACTTTGCAAGCCGATTCCCAAGGCTATTAATCGAAGTGTATAAAGTTATATCCAAGTATTGCAAAGAAGAACAATGTTTTGAGAGGTATTTCAAGAACCTTAATTAG 2301 0.402 MTGHCTCMINTLKISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKTGRIVQIHSMSDSDNSSTSWSDDKKSDTDILITKKKDLANPTELNSPELLLKIFRTDYSLRSVGPSSGVVLWTMTVSEFEAVLLCQHTSFDADDEYVSVGELGFAMPYPCQEIQPVFRLRKNFILEPSITERLPGSDHENNMLLMPASDLMLPSQANFEKLNIDDGNMMLPLPIPNSLPSPKPKIVYPSRMHEWSTPLRFMMLMVLGFVLYTLVVKSKDTPKDQNQSESKILPAKKKKTRKSAKNNVAVDKKEKHLSSEDEDVLMRKDLDIEAGRWMQFNQIDQGVDGRRVGKLLVSNKEIAKGSNGTIVFEGIYEGRAVAVKRLVKTHHDVAYKEIQNLIVSDHHPNIVRWHGVEYDQDFVYLALERCTCSLDDFIQIYSDISDNPLFRKNQAFKSSIEAQIDMGKDNMHGLWKANGYPSPLLLKLMRDVVSGIVHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKRLPEDMSALGHNATGAGSSGWQAPEQLGQGRQTRAVDLFSLGCVLFFCMTGGRHPFGERLERDVNIVKNRMDLFLVEFIPEAEDLVSSLLNPNPDIRPKAIEVLHHPFFWSPEMRLSFLRDASDRVELEDRETNSVLLNALESIATVALGAKWDEKLEPAFLTNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGTVPEGFNEYFASRFPRLLIEVYKVISKYCKEEQCFERYFKNLN 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01177 766 ProSiteProfiles Protein kinase domain profile. 344 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01177 766 PANTHER IRE1-RELATED 13 764 IPR045133 GO:0004521|GO:0004674|GO:0030968
Arst1g01177 766 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 455 632 - -
Arst1g01177 766 Gene3D KEN domain 634 766 IPR038357 -
Arst1g01177 766 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 634 766 - -
Arst1g01177 766 Pfam Protein kinase domain 347 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01177 766 ProSiteProfiles KEN domain profile. 633 764 IPR010513 GO:0004540|GO:0006397
Arst1g01177 766 CDD RNase_Ire1 634 762 - -
Arst1g01177 766 SUPERFAMILY Protein kinase-like (PK-like) 347 647 IPR011009 -
Arst1g01177 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Arst1g01177 766 Gene3D Transferase(Phosphotransferase) domain 1 458 632 - -
Arst1g01177 766 Gene3D Phosphorylase Kinase; domain 1 332 416 - -
Arst1g01177 766 MobiDBLite consensus disorder prediction 268 302 - -
Arst1g01177 766 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 336 416 - -
Arst1g01177 766 SMART serkin_6 344 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01177 766 Pfam Ribonuclease 2-5A 636 762 IPR010513 GO:0004540|GO:0006397
Arst1g01177 766 SMART PGNneu 695 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01177 Arst-Chr1 11557888 11561772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01177 324 629 MAP Kinase Kinase Kinase AT3G06030 24.516 3.93e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Arst1g01177 Pkinase 1.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01177 K08852 - gmx:100788389 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00397 5 3435024 3439416 Arst1g01177 1 11557888 11561772 PCT