Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01174 ATGATTAGAAATTGGGGCGTTGTGGTGTTGATTGTTCTTCTCTCCAATGGTTTCTGTTCAAATGGGGTTGGCTTGGATGATATTGATATTGATAATAATAATAGTAATAATACCACAATTCCTGATGTTGTAAATATTGGGGTTCTTTTCTCTTTCAATACAAGTGTTGGCAAAATTGTGAAAATCGCCGTAGAAGCCGCAGTTAAAGATGTAAATTCTGATCCATCAATTCTTGGCAAAACTCAGCTCAAGCTCTCACTTCAAGAAGATTCCAAATATAGAGGATTCTTGAGCATTGCTGAGGCATTGCAGCTCATGGCAACACACACTGTGGCCATAATTGGCCCACAGACCTCCACAACAGCTCATGTCATATCTCACATTGCGAACGAGCTTCGAGTTCCCCTGCTGTCGTTTACAGCCACTGACCCGACCCTTTCTTCACTTCAGTTCCCATTCTTCATTCGGACATCTTTTAATGATATGTATCAGATGACTGCAATAGCAGATCTTGTTAACTACTATGGTTGGAGGGAGGTTATTGCAGTCTATGGTGATGATGATCATGGGAGGAATGGAATTGGTGCCTTAGGGGACAAGCTAGCCGAGAGACGCTGCAAGATCTCGTTTAAAGCTCCTATGAGTCCTGAGGCAACCAGGGAGGAGATCACTGATGTGCTTGTTCAGGTAGCTCTGGCTGAATCGCGGGTTATAGTCCTTCACACAAGTACTACTTGGGGGCCGAAAGTGCTAAATGTGGCGAAATCTCTTGGAATGATGGAAAATGGTTATGTCTGGATAGCCACAACTTTTCTGTCTACCGGGATAGATATAAGTTCTCCACTTTCTTTGAGTGTAATGGATGACATTCAAGGAGTTATTGCGCTACGAATGTATGTGCCGGATTCAAAGCTTAAGAGATCTTTCATTTCGAGGTGGAAAAACTGGACTAATGGCTCCCTTGGATTGAGTACTTATGCTATCTTTGCATATGATACTGTCTATGTTCTTGCTCATGCGCTTGCTGCATTTTTTAAACAAGGGAACCGAATCACCTTTTCATCTGATTCAAAGACATCTCTAATACATGGTGACAACATGCATCTTGATGCTGTCAAGATATTCAACGAAGGAAAACTGCTGCGAAAAAGTATCTACGAGGTTAACATGACCGGTGTAACAGGTCACTTCAAGTATACATCTGATGGAAACCTTGCAAATCCGGCATATGAAATCATCAATGTGGTTGGAACAGGGACTAAGAGGATTGGTTATTGGTCTAATCACTCTGGACTATCATCTGTAAGTCCTGAAGAACTTCATTCAAAGCCGGCTAGTCATTCAAGTTCAAGTCAAAAGCTACTATCTGTGATTTGGCCAGGGGACACAACACAGAAACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGATGCTAAAAATTGGAGTTCCAAAAAGGATCAGTTACCGCGAATTCGTCTCACAAGTAAAAGGCACTGATATGTTCAAGGGGTTCTGCATTGATGTCTTTCTTTCTGCAGTGAACTTGTTGCCTTATGCTGTCCCCTATAAGTTTATTTCGTACGGAGACGGTCACAGCAATCCTAGTAACACTGAACTTGTCCGTCTTATCACCACCGGTGTGTTTGATGCTGCTGTAGGTGATATTACAATTACCACAGAAAGAACAAAGATGGTGGATTTTACGCAGCCATTCATAGAGTCCGGTCTAGTGGTAGTAGCATCAGTGAAGAAGACAGACTCAAATGCTTGGGCATTCTTGATGCCATTTACTCCAATGATGTGGACTGTCACAGCTATCTTCTTCCTAGTTGTTGGTGCTGTTGTCTGGATTTTAGAGCATAGGCTCAATGATGATTTTAGGGGACCTCCCAAAAAACAAGTAGCCACAATTTTGTGGTTCAGTTTCTCAACCATGTTTTTTGCACATAGGGAAAACACAGTGAGCACTCTCGGTCGATTCGTGCTGCTTATATGGTTATTCGTAGTTCTCATAATCAACTCGAGTTATACAGCAAGCTTGACTTCAATCCTCACAGTGCAACAACTTTCTTCACCAATTAAGGGCATTGAAAGTTTGATAAACAACAATGAGCCTATTGGCTACTTGCAGGGTTCTTTCACTAAAGGTTATTTAGTCAACGAAATTGGCATCGATGCGTCGAGACTTGTAGCTCTAACAACACCAGAAGAATCTGCCACTGCTCTGGACAAAGGTCCCCATAAAGGTGGCATCGCTGCATATGTCGACGAACGTGCATACATAGAGCTGTTCCTTTCAAGCCGCTGCGATTTCAGCATTGTTGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCACGAGACTCGCCATTAGCGGTTGACCTGTCAACAGCCATTTTGGAGTTGGCTGAGAACGGCGACCTTCAACGGATCCACGACAAATGGCTTTTGCGCAGTGCTTGCCTGTCGCAAGGTGCGAAGCTCGAAGTGGACAGACTCAAGCTGAGGAGCTTCTGGGGTCTCTACCTACTCTGTGGCTTGGCATGTTTGATTGCTCTCTTCGTATATCTGATTCAAACCATGAAGCAATACAAGAAGCACTACACCGAAGACGACAAGTCGTCGTCCGGTCTAAAGTCCACGCCGTCGCGACTAAGGACTTTCCTTACATTTGTAGATGAAAAGGAAGACACAGTTAAGAGCCGCTCCAAGAGAAGGAAAACGGAGATGGCATCATTCAAAAGTACAAGTGAGGTTGGATCATCCAATAATGGATATTCAGAATCATCTTCTCAAAGAATTGAGTGTACTAATAATGAGACATGA 2835 0.4321 MIRNWGVVVLIVLLSNGFCSNGVGLDDIDIDNNNSNNTTIPDVVNIGVLFSFNTSVGKIVKIAVEAAVKDVNSDPSILGKTQLKLSLQEDSKYRGFLSIAEALQLMATHTVAIIGPQTSTTAHVISHIANELRVPLLSFTATDPTLSSLQFPFFIRTSFNDMYQMTAIADLVNYYGWREVIAVYGDDDHGRNGIGALGDKLAERRCKISFKAPMSPEATREEITDVLVQVALAESRVIVLHTSTTWGPKVLNVAKSLGMMENGYVWIATTFLSTGIDISSPLSLSVMDDIQGVIALRMYVPDSKLKRSFISRWKNWTNGSLGLSTYAIFAYDTVYVLAHALAAFFKQGNRITFSSDSKTSLIHGDNMHLDAVKIFNEGKLLRKSIYEVNMTGVTGHFKYTSDGNLANPAYEIINVVGTGTKRIGYWSNHSGLSSVSPEELHSKPASHSSSSQKLLSVIWPGDTTQKPRGWVFPNNGRMLKIGVPKRISYREFVSQVKGTDMFKGFCIDVFLSAVNLLPYAVPYKFISYGDGHSNPSNTELVRLITTGVFDAAVGDITITTERTKMVDFTQPFIESGLVVVASVKKTDSNAWAFLMPFTPMMWTVTAIFFLVVGAVVWILEHRLNDDFRGPPKKQVATILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLINNNEPIGYLQGSFTKGYLVNEIGIDASRLVALTTPEESATALDKGPHKGGIAAYVDERAYIELFLSSRCDFSIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLRSACLSQGAKLEVDRLKLRSFWGLYLLCGLACLIALFVYLIQTMKQYKKHYTEDDKSSSGLKSTPSRLRTFLTFVDEKEDTVKSRSKRRKTEMASFKSTSEVGSSNNGYSESSSQRIECTNNET 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01174 944 Pfam Receptor family ligand binding region 61 417 IPR001828 -
Arst1g01174 944 SMART GluR_14 480 821 IPR001320 GO:0015276|GO:0016020
Arst1g01174 944 Pfam Ligand-gated ion channel 820 852 IPR001320 GO:0015276|GO:0016020
Arst1g01174 944 MobiDBLite consensus disorder prediction 898 944 - -
Arst1g01174 944 SUPERFAMILY Periplasmic binding protein-like I 40 471 IPR028082 -
Arst1g01174 944 Gene3D - 478 589 - -
Arst1g01174 944 FunFam Glutamate receptor 716 823 - -
Arst1g01174 944 FunFam Glutamate receptor 474 590 - -
Arst1g01174 944 MobiDBLite consensus disorder prediction 916 944 - -
Arst1g01174 944 MobiDBLite consensus disorder prediction 898 915 - -
Arst1g01174 944 FunFam Glutamate receptor 160 315 - -
Arst1g01174 944 Gene3D - 590 714 - -
Arst1g01174 944 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 44 895 IPR015683 -
Arst1g01174 944 Gene3D - 62 407 - -
Arst1g01174 944 Gene3D - 749 788 - -
Arst1g01174 944 SUPERFAMILY Periplasmic binding protein-like II 454 821 - -
Arst1g01174 944 Pfam Bacterial extracellular solute-binding proteins, family 3 536 819 IPR001638 -
Arst1g01174 944 CDD GluR_Plant 477 819 - -
Arst1g01174 944 Gene3D - 160 432 - -
Arst1g01174 944 FunFam Glutamate receptor 590 720 - -
Arst1g01174 944 PIRSF IGluLR_plant 7 944 IPR017103 -
Arst1g01174 944 PIRSF IGluLR_plant 7 944 IPR017103 -
Arst1g01174 944 CDD PBP1_GABAb_receptor_plant 45 435 IPR044440 -
Arst1g01174 944 Gene3D - 789 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01174 Arst-Chr1 11552536 11557768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01174 41 910 Ion Channels AT3G51480 61.309 0.0 1152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01174 K05387 - gmx:100788917 1492.63