Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01171 ATGATCAAAGTTTGGGTTCTTGTCATTGTGATGTTCTATAATGGTTTTCCATCAAAAGGGACAAGCAATAGTAATAATGTTACAAGGCCAAGTACAGTTAATGTTGGAGCAATTTTATCTTTTAATTCAACCATTGGAGGAGTGGCTAAAATTGCAATACAAGCAGCAGTAGATGATATAAATTCCAATGCAACCATTCTCAATGGAACTAAGTTTAATATCTCAATGCAGGACACAAAATTCTCCCCCGGATTTCTAGGAATTATTGACTCATTAATATTGATGGAGAAAGGCACTGTGGCAATAATTGGTCCACAGTACTCAGAAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTCCAATTCCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTGGCAGATATTGTTGATCACTTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCATATAAAGTACCCTTTAGGCCTAATAATAATAACAACATTAGTGAAGAAGAAATAAACAATGCATTATTCAAGATAGCTTTGATGGAATCAAGGGTAATAGTTGTTCATATAGTAGCAGATTTAGGGTTAAAAGTTCTTAAGGTTGCTCAATCACTTAGCATGATGGGGAGTGGTTATGTGTGGATAGCCACTGATTGGCTTTCCACTGTGTTAGATTCAAACCCTTCATTGTCCACAAGTTCAGCCATGAATGACATCCAAGGTGTTATTACCTTGCGCATGTATACACCTGATTCAGAATTGAAGAGGAAATTTGTGTCTAGGTGGAATAACCTAACCCTAAAAATGAATCATCAAGAGGGTCCTTTTGGATTGAACACCTTTGGTTTATATGCTTATGACACTGTTTGGGTCATAGCTTATGCTCTTGATGCTTTGTTTTCTGGGGGAAATAATAATAATAATAATAATAACAACAATCATAATATTTTATTCTCAAATGATTCAAGTCTAAACTTGTTAAGGGGTGACTCACTTCATCTTGATACTATGGGGGTGTTTATAAATGGTAGCACATTGCTTCAGAAGATTCTAGAAGTTAATCAAACCGGTTTAACCGGGCGGATGATGTTTGATTTAGATGGAAACTTGTTGAACCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATATTGGTCAGAATCATATGGTCTTCACACTGGTGAAGAAGTTCCAAATGATGGAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCTAGCAATGGAAGACATTTGAGAATTGGAGTGCCACTTAGGGTTAGCTACCATGAGTTTGTGTCAAGAATTGAAGGCACTGACATGTTTGGTGGTTATTGCATTGATGTGTTTTTTGCAGCACTAAACTTGTTGCCTTATCCAGTTCCATACAAATTTGTTTCTTTTGGTAATGGGAGAACCAATCCCTTGAATTCAGAACTTCTCCATCAGATCACAATTGGTGCCTTTGATGCCGTTATTGGGGATATTACTATTACTACAAACAGAAGTAAGATAGTGGATTTCACTCAGCCATATATAGAGTCAGGGTTAGTGGTTGTGGCACCTATCAAGGAATTGAAATCAAGTGCTTGGGCCTTTCTTATACCATTTACTCCAATGATGTGGTTTGTCACAGGAATGCTTTTTCTAATTGTTGGAGTTGTTGTGTGGATTTTAGAGCGGCCCTTTAATGATGACTTTAGAGGACCAATTAGAAGACAATTAGTCACTATTATTTGGTTTAGCTTTTCAACTCTAGTTTTCGCACATAAAGAGAAAACCGTTAGCACCCTTGGTCGCTTAGTCCTAATCATATGGTTGTTTGTGGTTCTAATACTAAGCTCTAGCTACACTGCAAGCCTAACATCAATTCTCACAGTGGAAAAACTCTCTTCCCCAGTGAAAGGAATTAAAAGCTTAGTGGTCAACAATGACCGAATTGGTATCATGAGTGGCACATATGCTGAAAATTATCTTAGTGAGGTGTTTAACATACATAGATCAAGGCTTGTTCCTTTCAATTCTCTATCTGAATTTGAGAAGGCTTTGAAGGATGGACAAGACAATGGTGGTGTTGCTGCTATCATAGCTGAGCGTGCATACATGGAGTTGTTCCTATCAACTAGATGTCAATTTGGTATTGTTGGCCAAGAATTCACCAAAATGGGATGGGGCTTTGCCTTTCCAAGGGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAGAATGGTGATCTTCAAAGGATTCATGACAAATGGCTAACAAGAAGTGCTTGTAGCTCAGAAGGTGCAAAACAAGGCATTGATAGGCTTGAGACTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGCTTGATTGCCCTCCTTTGCTATCTTATTAGAATGACCTACCGTTTTAGGAGGCACTACTCCAATAGTACCAACCTTGAAGTCCCATCATCATCGTCATGTTCTTCTTGTCTTAAATCATTCTTTTCTTTTGTCAATGAAAAGGAAAAGTAA 2718 0.3815 MIKVWVLVIVMFYNGFPSKGTSNSNNVTRPSTVNVGAILSFNSTIGGVAKIAIQAAVDDINSNATILNGTKFNISMQDTKFSPGFLGIIDSLILMEKGTVAIIGPQYSEMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADIVDHFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISYKVPFRPNNNNNISEEEINNALFKIALMESRVIVVHIVADLGLKVLKVAQSLSMMGSGYVWIATDWLSTVLDSNPSLSTSSAMNDIQGVITLRMYTPDSELKRKFVSRWNNLTLKMNHQEGPFGLNTFGLYAYDTVWVIAYALDALFSGGNNNNNNNNNNHNILFSNDSSLNLLRGDSLHLDTMGVFINGSTLLQKILEVNQTGLTGRMMFDLDGNLLNPSYEIINVIGTGVRRIGYWSESYGLHTGEEVPNDGNSSEGLYGVIWPGQTTQTPRGWVFASNGRHLRIGVPLRVSYHEFVSRIEGTDMFGGYCIDVFFAALNLLPYPVPYKFVSFGNGRTNPLNSELLHQITIGAFDAVIGDITITTNRSKIVDFTQPYIESGLVVVAPIKELKSSAWAFLIPFTPMMWFVTGMLFLIVGVVVWILERPFNDDFRGPIRRQLVTIIWFSFSTLVFAHKEKTVSTLGRLVLIIWLFVVLILSSSYTASLTSILTVEKLSSPVKGIKSLVVNNDRIGIMSGTYAENYLSEVFNIHRSRLVPFNSLSEFEKALKDGQDNGGVAAIIAERAYMELFLSTRCQFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLETKSFWGLFLLIGIACLIALLCYLIRMTYRFRRHYSNSTNLEVPSSSSCSSCLKSFFSFVNEKEK 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01171 905 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 874 IPR015683 -
Arst1g01171 905 CDD GluR_Plant 483 823 - -
Arst1g01171 905 Gene3D - 746 830 - -
Arst1g01171 905 Gene3D - 149 442 - -
Arst1g01171 905 Gene3D - 51 417 - -
Arst1g01171 905 PIRSF IGluLR_plant 1 898 IPR017103 -
Arst1g01171 905 PIRSF IGluLR_plant 1 898 IPR017103 -
Arst1g01171 905 SUPERFAMILY Periplasmic binding protein-like II 459 825 - -
Arst1g01171 905 FunFam Glutamate receptor 594 724 - -
Arst1g01171 905 Pfam Bacterial extracellular solute-binding proteins, family 3 543 824 IPR001638 -
Arst1g01171 905 Pfam Ligand-gated ion channel 825 856 IPR001320 GO:0015276|GO:0016020
Arst1g01171 905 SMART GluR_14 482 825 IPR001320 GO:0015276|GO:0016020
Arst1g01171 905 FunFam Glutamate receptor 149 311 - -
Arst1g01171 905 Gene3D - 595 731 - -
Arst1g01171 905 FunFam Glutamate receptor 720 827 - -
Arst1g01171 905 Gene3D - 477 594 - -
Arst1g01171 905 SUPERFAMILY Periplasmic binding protein-like I 29 474 IPR028082 -
Arst1g01171 905 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 107 135 - -
Arst1g01171 905 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 46 62 - -
Arst1g01171 905 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 330 342 - -
Arst1g01171 905 CDD PBP1_GABAb_receptor_plant 34 442 IPR044440 -
Arst1g01171 905 FunFam Glutamate receptor 478 594 - -
Arst1g01171 905 Pfam Receptor family ligand binding region 51 427 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01171 Arst-Chr1 11525835 11532435 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01171 5 905 Ion Channels AT3G51480 54.264 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01171 K05387 - gmx:100790502 1395.18