Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01169 ATGGAGAAAGGCACTGTGGCAATAATTGGTCCACAGTACTCAGAAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTCCAATTCCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTGGCAGATATTGTTGATCACTTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCATATAAAGTACCCTTTAGGCCTAATAATAATAACAACATTAGTGAAGAAGAAATAAACAATGCATTATTCAAGATAGCTTTGATGGAATCAAGGGTAATAGTTGTTCATATAGTAGCAGATTTAGGGTTAAAAGTTCTTAAGGTTGCTCAATCACTTAGCATGATGGGGAGTGGTTATGTGTGGATAGCCACTGATTGGCTTTCCACTGTGTTAGATTCAAACCCTTCATTGTCCACAAGTTCAGCCATGAATGACATCCAAGGTGTTATTACCTTGCGCATGTATACACCTGATTCAGAATTGAAGAGGAAATTTGTGTCTAGGTGGAATAACCTAACCCTAAAAATGAATCATCAAGAGGGTCCTTTTGGATTGAACACCTTTGGTTTATATGCTTATGACACTGTTTGGGTCATAGCTTATGCTCTTGATGCTTTGTTTTCTGGGGGAAATAATAATAATAATAATAATAACAACAATCATAATATTTTATTCTCAAATGATTCAAGTCTAAACTTGTTAAGGGGTGACTCACTTCATCTTGATACTATGGGGGTGTTTATAAATGGTAGCACATTGCTTCAGAAGATTCTAGAAGTTAATCAAACCGGTTTAACCGGGCGGATGATGTTTGATTTAGATGGAAACTTGTTGAACCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATATTGGTCAGAATCATATGGTCTTCACACTGGTGAAGAAGTTCCAAATGATGGAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCTAGCAATGGAAGACATTTGAGAATTGGAGTGCCACTTAGGGTTAGCTACCATGAGTTTGTGTCAAGAATTGAAGGCACTGACATGTTTGGTGGTTATTGCATTGATGTGTTTTTTGCAGCACTAAACTTGTTGCCTTATCCAGTTCCATACAAATTTGTTTCTTTTGGTAATGGGAGAACCAATCCCTTGAATTCAGAACTTCTCCATCAGATCACAATTGGTGTGTTTGATGCTGTGGTTGGGGACATTACTATTACTACAAACAGAACAAAGGTAGTGGATTTCACTCAACCATATATTGAATCAGGACTAGTTGTTGTGGCACCTATCAAGAAAATGAAATCAAGTGCATGGGCCTTCCTCACACCATTTACTCCAATGATGTGGTTTGTCACAGCAACCTTTTTCTTAGTTGTTGGAGTTGTTATCTGGATTTTAGAGCGCCGTGTCAATGATGATTTTAGAGGACCTCCTAGAAGACAGTTAGTCACTATTATTTGGTTTAGCTTTTCAACTTTATTTTTTGCACATAGAGAAAAAACTGTTAGCACTCTTGGTCGCATAGTCCTAATCATATGGCTGTTTGTGGTTTTAATACTGAATTCAAGCTACATTGCAAGCCTAACATCAATTCTCACAGTGGAACAACTCTCTTCCCCAGTGAAAGGGATTGAAAGCTTAGTGATAAGCAATGACCGAATTGGTTTCTTAAGAGGTTCATTTGCTGAGAATTATCTTAGTGATGAACTTAACATACATAGGTCAAGGCTTGTTCCTCTGAATGACCCTTCAGAATATGAGAAGGCATTGAAGGATGGAGCTGCTAATGGTGGTGTTGCTGCAATCATAGATGAACGAGCATACATGGAGCTGTTCTTAGCAACTAGATGTGAATTTGGGATTGTTGGTCAAGAGTTTACTAAGATGGGATGGGGCTTTGGCTTTCCAAAGGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAAAATGGTGATCTTCAAAGGATTCATGACAAATGGCTAACAAGAAGTGCTTGTAGCTCAGAAGGTGCAAAGCAAGGCATAGATAGGCTTGAGATTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGTTTCATTGCTCTCTTTTGCTATCTTACTAGAATGACCTACCGTTTTAGGAGGCACTACTCCAATAGTACCAACCTTGAAGTCCCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATGCTCTTCTTGTCTTAAATCATTCTTTTCATTTGTCAATGAGAGAGAAGATTATTACTGCCCAAAGTAA 2484 0.3849 MEKGTVAIIGPQYSEMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADIVDHFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISYKVPFRPNNNNNISEEEINNALFKIALMESRVIVVHIVADLGLKVLKVAQSLSMMGSGYVWIATDWLSTVLDSNPSLSTSSAMNDIQGVITLRMYTPDSELKRKFVSRWNNLTLKMNHQEGPFGLNTFGLYAYDTVWVIAYALDALFSGGNNNNNNNNNNHNILFSNDSSLNLLRGDSLHLDTMGVFINGSTLLQKILEVNQTGLTGRMMFDLDGNLLNPSYEIINVIGTGVRRIGYWSESYGLHTGEEVPNDGNSSEGLYGVIWPGQTTQTPRGWVFASNGRHLRIGVPLRVSYHEFVSRIEGTDMFGGYCIDVFFAALNLLPYPVPYKFVSFGNGRTNPLNSELLHQITIGVFDAVVGDITITTNRTKVVDFTQPYIESGLVVVAPIKKMKSSAWAFLTPFTPMMWFVTATFFLVVGVVIWILERRVNDDFRGPPRRQLVTIIWFSFSTLFFAHREKTVSTLGRIVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVISNDRIGFLRGSFAENYLSDELNIHRSRLVPLNDPSEYEKALKDGAANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFGFPKDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLEIKSFWGLFLLIGIACFIALFCYLTRMTYRFRRHYSNSTNLEVPSSSSSSSSSSSSSSSCSSCLKSFFSFVNEREDYYCPK 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01169 827 SMART GluR_14 388 731 IPR001320 GO:0015276|GO:0016020
Arst1g01169 827 Gene3D - 628 733 - -
Arst1g01169 827 FunFam Glutamate receptor 626 733 - -
Arst1g01169 827 MobiDBLite consensus disorder prediction 785 808 - -
Arst1g01169 827 PIRSF IGluLR_plant 1 825 IPR017103 -
Arst1g01169 827 PIRSF IGluLR_plant 1 825 IPR017103 -
Arst1g01169 827 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst1g01169 827 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst1g01169 827 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst1g01169 827 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst1g01169 827 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 793 IPR015683 -
Arst1g01169 827 FunFam Glutamate receptor 500 630 - -
Arst1g01169 827 CDD GluR_Plant 389 729 - -
Arst1g01169 827 Pfam Bacterial extracellular solute-binding proteins, family 3 449 730 IPR001638 -
Arst1g01169 827 Gene3D - 380 499 - -
Arst1g01169 827 FunFam Glutamate receptor 384 500 - -
Arst1g01169 827 FunFam Glutamate receptor 55 217 - -
Arst1g01169 827 Pfam Ligand-gated ion channel 731 762 IPR001320 GO:0015276|GO:0016020
Arst1g01169 827 Gene3D - 500 627 - -
Arst1g01169 827 Pfam Receptor family ligand binding region 3 333 IPR001828 -
Arst1g01169 827 SUPERFAMILY Periplasmic binding protein-like I 2 380 IPR028082 -
Arst1g01169 827 SUPERFAMILY Periplasmic binding protein-like II 365 731 - -
Arst1g01169 827 Gene3D - 1 323 - -
Arst1g01169 827 Gene3D - 55 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01169 Arst-Chr1 11511966 11517760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01169 1 822 Ion Channels AT3G51480 56.917 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01169 K05387 - gmx:100789442 1325.07