Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01168 ATGAGCAAAGATTGGGTTCTTATTGTGTTTGTGATATTTGTTTCAAGTAGTGGAATATTATTCAGCAATAATGTTTGTGCAAAACCACCTCCTAATGTTAACATAGGAGCAATTTTAGCTCTCAACTCAACCATTGGAAAGGTGGCGAAAATTGCTATAGAAGCAGCAGTGAATGATGTAAATTCAGATTCAACCATTCTCAGTGGAACCAAGCTTAACATCTCTATGCAAGACACAAAATTATCAACTGGATTTCTAGGAATCATTGACTCATTGCTATTGATGGAGAAGGACACTGTGGCCATAATTGGTCCACAATACTCAGTAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTTCAATTTCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTAGCAGATGTTATTGATCAATTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCACACAAAGCAGCCCTTAAGCCTGATGATACCAATGTCAACAAGGAAGAAATGAATAGTGCATTAGTTAAAATTGCTTTAATGGAGTCTAGGGTTATAGTTCTTCACATTTACCCTTCTTTTGGCCTTGAAGTTCTTCATATTGCACAATCATTAGGCATGATGATAAGTGGTTATGTGTGGATAGTTACTGATTGGCTCACAACTGCTCTTGATTCTGATCCATCATTGGCTACAACTTCAATCATGAATGATATGCAAGGTGTTATCACCTTGAGAATGCACACACCAGATTCAAGAATCAAGAGCAATTTTGAGTCTAGGTGGCCCAAACTAGCTCATCAAAATAATGATGAGGGTCCTTTTGGATTGAACATCTTTGGTTTATATGCTTATGACACTGTTTGGACCTTAGCTTATGCACTTGATGCATTCTTTAGAAGTGGTGGAACTTTGAAATTTTCAAATGATTCAAGTTTAAACACTTTAAGGGGTGATGGTGATACCCTTCATCTTGATGCTATGGGAATGTTTCTTAATGGTAGCATGTTGCTTCAGAAGATTCTAGAAGTTAATCGAACCGGTTTAACCGGCCGAATAGAGTTTTCTCAAGATGGAAACCTAATGAATCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATTTTGGTCTAATTCTTCTGGCCTTCACACTGGTGAACAAGTTCCAAATCATGGAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCCAACAATGGAAAACAATTGAGAATTGGGGTGCCACTTAGGGTTAGCTACCATGAATTTGTGTCAAGAACTGAAGGCACTGACAAGTTTAGTGGTTATTGCATTGATGTGTTCACAGCTGCCTTGGAATTGTTGCCTTATCCAGTCCCAAATAAGTTTATTCCATTTGGTGATGGTAAAGCCAATCCATTGAATTCATTACTTCTTCAGAGGGTCACACTTGGTGAGTTTGATGCTGTGGTGGGCGACATTACCATTACCACAAACAGAACTAAGATTGTGGATTTCACACAACCATACATTGAATCCGGTTTAGTTGTTGTGGCACCAATAAGGAAGATGAAATCTAATGCTTGGGCCTTTCTAAGACCATTTACTCCAATGATGTGGCTTGTCACAGGAATGTTTTTCTTAGCTGTTGGGGCTGTTGTTTGGATTTTAGAACGTCGCTTGAATGATGATTTTAGAGGCACTCCTAGGAGACAATTTGTCACCATTATATGGTTTAGCTTCTCAACCTTGTTCTTTGCACATAGAGAGAAAACTGTTAGCACTCTTGGCCGATTAGTCTTAATCATATGGCTGTTTGTGGTTTTAATACTGAATTCAAGCTACATTGCAAGCCTAACATCAATCCTCACAGTGGAACAACTCTCTTCCCCAATTAAGGGGATTGAAAGCTTAGCAACAAGCAATGAAAGAATTGGTTACTTGAGAGGATCATTTGCTGAGAATTATCTAACAGATGAACTCAACATACATAGGTCAAGGCTTGTTCCTCTCAATGACCCTTCAGAATATGAGAAGGCGTTGAAGGATGGAGCTGCTAATGGTGGTGTTGCTGCAATCATAGATGAACGTGCATACATGGAGTTGTTCCTAGCAAGTAGGTGTGAATTTGGGATTGTTGGTCAAGAGTTTACCAAGATGGGTTGGGGCTTTGTAAGTATTTTGAAATATGCTTCTTTTTTAATTTTAAATATATATATATTTAAAAAAATTCAATTTTAA 2409 0.3831 MSKDWVLIVFVIFVSSSGILFSNNVCAKPPPNVNIGAILALNSTIGKVAKIAIEAAVNDVNSDSTILSGTKLNISMQDTKLSTGFLGIIDSLLLMEKDTVAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADVIDQFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISHKAALKPDDTNVNKEEMNSALVKIALMESRVIVLHIYPSFGLEVLHIAQSLGMMISGYVWIVTDWLTTALDSDPSLATTSIMNDMQGVITLRMHTPDSRIKSNFESRWPKLAHQNNDEGPFGLNIFGLYAYDTVWTLAYALDAFFRSGGTLKFSNDSSLNTLRGDGDTLHLDAMGMFLNGSMLLQKILEVNRTGLTGRIEFSQDGNLMNPSYEIINVIGTGVRRIGFWSNSSGLHTGEQVPNHGNSSEGLYGVIWPGQTTQTPRGWVFANNGKQLRIGVPLRVSYHEFVSRTEGTDKFSGYCIDVFTAALELLPYPVPNKFIPFGDGKANPLNSLLLQRVTLGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSNAWAFLRPFTPMMWLVTGMFFLAVGAVVWILERRLNDDFRGTPRRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPIKGIESLATSNERIGYLRGSFAENYLTDELNIHRSRLVPLNDPSEYEKALKDGAANGGVAAIIDERAYMELFLASRCEFGIVGQEFTKMGWGFVSILKYASFLILNIYIFKKIQF 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01168 802 Gene3D - 583 718 - -
Arst1g01168 802 FunFam Glutamate receptor 743 778 - -
Arst1g01168 802 FunFam Glutamate receptor 468 584 - -
Arst1g01168 802 PIRSF IGluLR_plant 1 790 IPR017103 -
Arst1g01168 802 PIRSF IGluLR_plant 1 790 IPR017103 -
Arst1g01168 802 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 46 62 - -
Arst1g01168 802 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 107 135 - -
Arst1g01168 802 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 328 340 - -
Arst1g01168 802 SUPERFAMILY Periplasmic binding protein-like II 449 781 - -
Arst1g01168 802 FunFam Glutamate receptor 584 714 - -
Arst1g01168 802 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Arst1g01168 802 Gene3D - 149 432 - -
Arst1g01168 802 Pfam Ligand-gated ion channel 595 698 IPR001320 GO:0015276|GO:0016020
Arst1g01168 802 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 781 IPR015683 -
Arst1g01168 802 Gene3D - 51 407 - -
Arst1g01168 802 SMART GluR_14 474 798 IPR001320 GO:0015276|GO:0016020
Arst1g01168 802 FunFam Glutamate receptor 149 308 - -
Arst1g01168 802 Gene3D - 463 582 - -
Arst1g01168 802 Pfam Receptor family ligand binding region 51 417 IPR001828 -
Arst1g01168 802 Pfam Bacterial extracellular solute-binding proteins, family 3 483 747 IPR001638 -
Arst1g01168 802 CDD PBP1_GABAb_receptor_plant 34 432 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01168 Arst-Chr1 11463153 11467078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01168 1 780 Ion Channels AT1G42540 59.645 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01168 K05387 - gmx:100790502 1251.5