Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01166 ATGCAGCAGGGAGGAGGATCCGACACGGAAGTGACATGGGAGGACGAGCAGAACATCAATAAGTTGGGAAGATTGAACAATCGCTTTCTGCTAGTCCCGCTCCTTCTGCTCCGCTCTCTTCGCCGGTCTTCTTCTCAGGAATTAGACATTGGGATTGAAGACTTGAAAGCAAATCCAGAAGAGAAATCAAAGTTTTCACCAACATTGCGATTTGGAAGTTGTTCTGAGAAAGGACCAAAGCAGTTCATGGAAGATGAGTTTATTTGTGTTGATATCATTCACGAATATTCCAGTGCTGCCACCATGCCTTCTCCAGCAGGATTTTATGGGGTATTTGATGGGCATGGAGGAATTGATGCGGCATCATTTACCAAAATAAACATTCTTAAGCTAATAGTTGAAGATTCACATTTTCCATCCAACATTAAGAAAGCTATTAAGAGTGCATTTGTGAAAGTGGATCATGCATTTGCAGATGCTACTTCACTTGATAGTTCTTCAGGCACCACAGCAATTGTTGCCCTTATTTTGGAAAGGGACTTGATAGTTGCCAATGTGGGGGATTCTCGTGCCGTAATGGGAAAAAGAGGTAAAGCCATAGAACTTTCCAAAGATCATAAGCCAAACAGCACTTCTGAAAGATTAAGAATTGAGAAACTAGGTGGTGTGATCTATGATGGATACCTCAATGGACAACTATCAGTGGCACGTGCTCTTGGGGATTGGCACATCAAAGGTTACAAAGGTAATTCAATGTGCCCATTAAGCTCAGAGCCAGAATTAGAAGAGGTTGTATTAACAGAAGAAGATGAGTTCTTAATAATGGGGTGTGATGGATTATGGGATGTGATGAGTAGCCAATATGCTGTAACAATGGTGAGAAAGGAGCTGATGAAACACAATGATCCAATGGAATGTGCAAGAGCTCTTGTTTCTGAAGCACTTCAACGCAATGCATGTGACAATCTCACTGTTTTGGTCATTTGTTTCTCCATGGATCCACCTCCTAAGATTGAAATCATCTCTAGGTTACATAAGAGGAGGAGTATTTCTGCTGAAGCCATTGATGTTCTCAAGGGTTTGATCAATGCCACAACTTAA 1101 0.416 MQQGGGSDTEVTWEDEQNINKLGRLNNRFLLVPLLLLRSLRRSSSQELDIGIEDLKANPEEKSKFSPTLRFGSCSEKGPKQFMEDEFICVDIIHEYSSAATMPSPAGFYGVFDGHGGIDAASFTKINILKLIVEDSHFPSNIKKAIKSAFVKVDHAFADATSLDSSSGTTAIVALILERDLIVANVGDSRAVMGKRGKAIELSKDHKPNSTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGYKGNSMCPLSSEPELEEVVLTEEDEFLIMGCDGLWDVMSSQYAVTMVRKELMKHNDPMECARALVSEALQRNACDNLTVLVICFSMDPPPKIEIISRLHKRRSISAEAIDVLKGLINATT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01166 366 ProSitePatterns PPM-type phosphatase domain signature. 108 116 IPR000222 GO:0043169
Arst1g01166 366 CDD PP2Cc 70 330 IPR001932 -
Arst1g01166 366 SMART PP2C_4 60 328 IPR001932 -
Arst1g01166 366 PANTHER PROTEIN PHOSPHATASE 2C 57 328 IPR015655 GO:0004722|GO:0006470
Arst1g01166 366 FunFam Probable protein phosphatase 2C 22 55 333 - -
Arst1g01166 366 Pfam Protein phosphatase 2C 70 322 IPR001932 -
Arst1g01166 366 SUPERFAMILY PP2C-like 62 330 IPR036457 -
Arst1g01166 366 SMART PP2C_SIG_2 85 330 IPR001932 -
Arst1g01166 366 Gene3D - 52 333 IPR036457 -
Arst1g01166 366 ProSiteProfiles PPM-type phosphatase domain profile. 70 330 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01166 Arst-Chr1 11454654 11472614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01166 63 363 PP2C-type Phosphatase Gene Family AT3G51470 74.086 1.18e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01166 K14803 - cave:132171122 470.7