Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01162 ATGAAGTATGCAAATTTGAATGATGATTCATTGCTTCAGAAGGAGTTATCTCCAATGAACCTTGTAAGATCCTTGTCAGCTCCTCTATCAGGAAGATTTAGCCGCTTTTCGAACGGTGATCAAATTCGGAAGAAGCTTGAAGATCTTGAAAGGATGTCTTTTGATGCTAAGAAGAAGAAGAAAGATAGATTTGGAATTAGAGAAAAAGTTTCTTATCTTAAACAAAAGTTTGGTCTAAGAGGCAAGATTTTTGCCAAAAGGATTCATTCAATGGTTGAAACTCCTAATAGCATTGAAGATGGTTTCATGGTGAGAGACATTAGAAGTGGACCAACTGTTCTCATGAAACATGGGAGAAACCATGATAACTTCACCGAGGTTCCTCCTAGTCCTGCATCTATGTGTAGCAGTGTTCATGAAGAACTTTGGAGGCAGAATGCAATTTTAAGTCCAATTTCAACTCCAAGTGTATCTTCAGTAGATGATAGCATTATGCCACAGGTTTATGGAGATATCAGCTCTGATTTAAATGAACTAAGTAAGCAACTTAGCCAACTTGAGTTTGACAGCTCAGAGGAATTCGCAACAAAGCGAAAATCTGCCGAGTACAAATTAGAACGGCTACTCGATCCGGCGGAGACTTATATAAGAGATCTTCTTGTTGCTTCTGGACTTTACTTTGGATCATGGGACAAATACCTTCAAAGAGAGGACACATTTACAAAGCCTATAGCCAACTCAATTTTTGAAGAAGTGGAAGAATCTCACAAGAAATGTTTGGTTAAAGAGAATATTATTGATAACAAGTTAGATCACAAAATGTTACTTGATTTGTTAAACGAGGCACTTTCCATTGTTCTTGGACAACCTTTGACAATGTCTAAATTCAGAAGGAAACTCAATAATTCATGCATAATACAAACTCCACCATGTGGGAAGGAACTATTGAAGCTAGTATGGGACATTATCCATGTTTCGTTGTATCCTCCAATGTCTAACACATGTTCTTATTCATTTGATAGTTTGAAGGCACAAGATTTTGGATCCATGTCATTGTATGGACTAATGAATGATGAGATCAATGTCTTAGAAATGGAGATGGCATGTTCAATTAGTGATGATTTGGTTGAAGAACTCATAAAGGATATGATGGGATTTTAA 1161 0.3669 MKYANLNDDSLLQKELSPMNLVRSLSAPLSGRFSRFSNGDQIRKKLEDLERMSFDAKKKKKDRFGIREKVSYLKQKFGLRGKIFAKRIHSMVETPNSIEDGFMVRDIRSGPTVLMKHGRNHDNFTEVPPSPASMCSSVHEELWRQNAILSPISTPSVSSVDDSIMPQVYGDISSDLNELSKQLSQLEFDSSEEFATKRKSAEYKLERLLDPAETYIRDLLVASGLYFGSWDKYLQREDTFTKPIANSIFEEVEESHKKCLVKENIIDNKLDHKMLLDLLNEALSIVLGQPLTMSKFRRKLNNSCIIQTPPCGKELLKLVWDIIHVSLYPPMSNTCSYSFDSLKAQDFGSMSLYGLMNDEINVLEMEMACSISDDLVEELIKDMMGF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01162 386 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 6 383 - -
Arst1g01162 386 Pfam Domain of unknown function (DUF4378) 214 378 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01162 Arst-Chr1 11412831 11416225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01162 6 383 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 38.875 8.89e-64 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01162 - - adu:107478751 767.689