Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01152 ATGCCGAAGGTTAAAGCCGACGCGAAAGCTGCTGATAACCGGTTGAAGCGCAAGGGCGCTGGAACCGGAAGGAAGCAGGCTAAGAAAGCTAAGGATCCTAACAAGCCGAAGAGGCCTCCAAGCGCTTTCTTCGTTTTCATGTCTGAGTTCAGAGAACAGTACAAGAAGGAGCACCCAAGCAACAAATCCGTTGCAGTTGTTGGCAAGGCTGGTGGTGACAGGTGGAAATCAATGTCTGATGCTGATAAAGCTCCCTACCAAGCTAAGGCAGAGAAAAAGAAAGAGGAGTATGAAAGGAGTATGCAAGCCTACAACAAAAAACAGGAGAGTAAGGGTGCTTCTGAGGAAGATGAATCTGACAAGTCAAAGTCTGAAGTAAATGATGAGGATGAGGATGAGGAGGATGATGATGACGAGTGA 420 0.4738 MPKVKADAKAADNRLKRKGAGTGRKQAKKAKDPNKPKRPPSAFFVFMSEFREQYKKEHPSNKSVAVVGKAGGDRWKSMSDADKAPYQAKAEKKKEEYERSMQAYNKKQESKGASEEDESDKSKSEVNDEDEDEEDDDDE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01152 139 MobiDBLite consensus disorder prediction 1 42 - -
Arst1g01152 139 SUPERFAMILY HMG-box 22 106 IPR036910 -
Arst1g01152 139 CDD HMG-box_AtHMGB1-like 37 86 - -
Arst1g01152 139 Pfam HMG (high mobility group) box 36 105 IPR009071 -
Arst1g01152 139 SMART hmgende2 35 106 IPR009071 -
Arst1g01152 139 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 36 105 IPR009071 -
Arst1g01152 139 MobiDBLite consensus disorder prediction 122 139 - -
Arst1g01152 139 MobiDBLite consensus disorder prediction 54 139 - -
Arst1g01152 139 MobiDBLite consensus disorder prediction 1 36 - -
Arst1g01152 139 Gene3D High mobility group box domain 20 132 IPR036910 -
Arst1g01152 139 MobiDBLite consensus disorder prediction 75 121 - -
Arst1g01152 139 Coils Coil 87 110 - -
Arst1g01152 139 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 5 137 IPR031061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01152 Arst-Chr1 11373400 11375187 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Arst1g01152 HMG_box 1.1e-23 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01152 K25507 - gmx:100305957 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01152 1 11373400 11375187 Arst1g01152 1 11373400 11375187 ECH