Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst1g01152 | ATGCCGAAGGTTAAAGCCGACGCGAAAGCTGCTGATAACCGGTTGAAGCGCAAGGGCGCTGGAACCGGAAGGAAGCAGGCTAAGAAAGCTAAGGATCCTAACAAGCCGAAGAGGCCTCCAAGCGCTTTCTTCGTTTTCATGTCTGAGTTCAGAGAACAGTACAAGAAGGAGCACCCAAGCAACAAATCCGTTGCAGTTGTTGGCAAGGCTGGTGGTGACAGGTGGAAATCAATGTCTGATGCTGATAAAGCTCCCTACCAAGCTAAGGCAGAGAAAAAGAAAGAGGAGTATGAAAGGAGTATGCAAGCCTACAACAAAAAACAGGAGAGTAAGGGTGCTTCTGAGGAAGATGAATCTGACAAGTCAAAGTCTGAAGTAAATGATGAGGATGAGGATGAGGAGGATGATGATGACGAGTGA | 420 | 0.4738 | MPKVKADAKAADNRLKRKGAGTGRKQAKKAKDPNKPKRPPSAFFVFMSEFREQYKKEHPSNKSVAVVGKAGGDRWKSMSDADKAPYQAKAEKKKEEYERSMQAYNKKQESKGASEEDESDKSKSEVNDEDEDEEDDDDE | 139 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst1g01152 | 139 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Arst1g01152 | 139 | SUPERFAMILY | HMG-box | 22 | 106 | IPR036910 | - | |
Arst1g01152 | 139 | CDD | HMG-box_AtHMGB1-like | 37 | 86 | - | - | |
Arst1g01152 | 139 | Pfam | HMG (high mobility group) box | 36 | 105 | IPR009071 | - | |
Arst1g01152 | 139 | SMART | hmgende2 | 35 | 106 | IPR009071 | - | |
Arst1g01152 | 139 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 36 | 105 | IPR009071 | - | |
Arst1g01152 | 139 | MobiDBLite | consensus disorder prediction | 122 | 139 | - | - | |
Arst1g01152 | 139 | MobiDBLite | consensus disorder prediction | 54 | 139 | - | - | |
Arst1g01152 | 139 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Arst1g01152 | 139 | Gene3D | High mobility group box domain | 20 | 132 | IPR036910 | - | |
Arst1g01152 | 139 | MobiDBLite | consensus disorder prediction | 75 | 121 | - | - | |
Arst1g01152 | 139 | Coils | Coil | 87 | 110 | - | - | |
Arst1g01152 | 139 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 4-RELATED | 5 | 137 | IPR031061 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst1g01152 | Arst-Chr1 | 11373400 | 11375187 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | HMG | Arst1g01152 | HMG_box | 1.1e-23 | CL0114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst1g01152 | K25507 | - | gmx:100305957 | 177.563 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst1g01152 | 1 | 11373400 | 11375187 | Arst1g01152 | 1 | 11373400 | 11375187 | ECH |