Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01140 ATGGGTGGTTCTGATGAAAACAATTCTAATTCAACCTTGCCCAGAATTCTTCAAGCAGGGATGAATAATCAGAATCAGAATGTTGGTACAAGAAAGTTTGGACAGAACAGAAGAGCATTGAGTGTGATCAATCAGAATCTAGTGCAAGGTCGATCTTACCCTTGTGTTGTTAACAAGAGACCTTTGCCTGGAAAACAAGAAATGTGTGAAAAGAAGCAGGCAGATCCAGTGCATCGTCCCATCACAAGGAGGTTTGCTGCTCAAATTGCTTCCCAGCAACAACAATCTTGTGCTGAGGATCCTACCAAGTCGAACCCCTCGAATTCGACCAGATTTGAAGACTTAATCCTCATCGATGAGGAACAAAAGTTAACAGCAGATCAACCAGTGCCCATGTCCTTGGAGAAACCAAAACTAGTGCAGGAGGAAATTGAGATGGAGGATATAGTTGAGGAGGAGTCTATTATAAACATCGATAGCAGCGATGTGGATGATCATCTTGCGGTGGTTGAATACATCGAAGATCTTCATGCACACTACAGAAAATTTGAGAGTTTGAACTGTGTCTCGCCGGATTATATGGCGCAACAATTTGACATTAATGAAAGAATGAGGGCTATACTTGTTGACTGGCTCATTGAGGTGCATGATAAATTCAACCTGATGCAAGAGACATTGTTTCTTACAATTAATCTCATAGACAGATTCTTGGCCAAACAAACTGTGATACGAAAGAAGCTTCAGCTGGTTGGTTTGGTTGCCATGCTTTTGGCTTGCAAGTATGAGGAAGTTTCTGTGCCGGTGGTTGGCGATTTAATCCTTATTTCGGATAAAGCTTACACAAGGAAGGATGTTCTGGACATGGAGAAGTTGATGCTCAACACATTGCAGTTTAACATTTCTGTGCCAACTGCATATGTTTTTATGAGAAGATTCCTGAAGGCAGCTCAAGCCGACAAAAAACTTGAGCTGCTGGCTTTCTTCTTGATAGAGCTCTCTCTTGTGGAATATGATATGCTGAAGTTCCCGGCATCTTTGCTAGCTGCGGCCGCAGTCTACACGGCTCAATGCACTGTCAGTGGCTTCAAACAATGGAACAAGACATGTGAATGGCACACAAACTACTCAGAAGATCAGATATTCGAGTGCTCTCGGATGATGGTTGGCTTACACCAGAAGGCCGCGACTGCGAAACTCACTGGTGTGCGTAGGAAGTACAGTTCATCTAACTATAGCTATACTGCAAAATGCGAACCGGCATGTTTTCTTCTGGAGAACCAATTCTAG 1287 0.4305 MGGSDENNSNSTLPRILQAGMNNQNQNVGTRKFGQNRRALSVINQNLVQGRSYPCVVNKRPLPGKQEMCEKKQADPVHRPITRRFAAQIASQQQQSCAEDPTKSNPSNSTRFEDLILIDEEQKLTADQPVPMSLEKPKLVQEEIEMEDIVEEESIINIDSSDVDDHLAVVEYIEDLHAHYRKFESLNCVSPDYMAQQFDINERMRAILVDWLIEVHDKFNLMQETLFLTINLIDRFLAKQTVIRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKDVLDMEKLMLNTLQFNISVPTAYVFMRRFLKAAQADKKLELLAFFLIELSLVEYDMLKFPASLLAAAAVYTAQCTVSGFKQWNKTCEWHTNYSEDQIFECSRMMVGLHQKAATAKLTGVRRKYSSSNYSYTAKCEPACFLLENQF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01140 428 SUPERFAMILY Cyclin-like 164 300 IPR036915 -
Arst1g01140 428 SUPERFAMILY Cyclin-like 302 419 IPR036915 -
Arst1g01140 428 CDD CYCLIN_AtCycB-like_rpt1 152 298 - -
Arst1g01140 428 ProSitePatterns Cyclins signature. 205 236 IPR006671 -
Arst1g01140 428 SMART cyclin_7 307 389 IPR013763 -
Arst1g01140 428 SMART cyclin_7 210 294 IPR013763 -
Arst1g01140 428 CDD CYCLIN_AtCycB-like_rpt2 303 419 - -
Arst1g01140 428 Pfam Cyclin, N-terminal domain 179 301 IPR006671 -
Arst1g01140 428 FunFam G2/mitotic-specific cyclin-1 289 415 - -
Arst1g01140 428 Gene3D - 189 301 - -
Arst1g01140 428 MobiDBLite consensus disorder prediction 89 109 - -
Arst1g01140 428 Pfam Cyclin, C-terminal domain 303 418 IPR004367 -
Arst1g01140 428 SMART Cyclin_C_2 303 420 IPR004367 -
Arst1g01140 428 Gene3D - 175 415 - -
Arst1g01140 428 PANTHER CYCLINS 123 408 IPR039361 -
Arst1g01140 428 PIRSF Cyclin_A_B_D_E 3 428 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01140 Arst-Chr1 11235077 11238569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01140 1 424 Core Cell Cycle Gene Families AT1G20610 55.427 8.29e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01140 K21777 - gmx:100779889 572.392