Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01139 ATGGGTGGTTCTGATGAAAACAATTCTAATTCAACCTTGCCCAGAATTCTTCAAGGGATGAATAATCAGAATCAGAATGTTGGTACAAGAAAGTTTGGACAGAACAGAAGAGCATTGAGTGTGATCAATCAGAATCTAGTGCAAGGTCGATCTTACCCTTGTGTTGTTAACAAGAGACCTTTGCCTGGAAAACAAGAAATGTGTGAAAAGAAGCAGGCAGATCCAGTGCATCGTCCCATCACAAGGAGGTTTGCTGCTCAAATTGCTTCCCAGCAACAACAATCTTGTGCTGAGGATCCTACCAAGTCGAACCCCTCGAATTCGACCAGATTTGAAGACTTAATCCTCATCGATGAGGAACAAAAGTTAACAGCAGATCAACCAGTGCCCATGTCCTTGGAGAAACCAAAACTAGTGCAGGAGGAAATTGAGATGGAGGATATAGTTGAGGAGGAGTCTATTATAAACATCGATAGCAGCGATGTGGATGATCATCTTGCGGTGGTTGAATACATCGAAGATCTTCATGCACACTACAGAAAATTTGAGAGTTTGAACTGTGTCTCGCCGGATTATATGGCGCAACAATTTGACATTAATGAAAGAATGAGGGCTATACTTGTTGACTGGCTCATTGAGGTGCATGATAAATTCAACCTGATGCAAGAGACATTGTTTCTTACAATTAATCTCATAGACAGATTCTTGGCCAAACAAACTGTGATACGAAAGAAGCTTCAGCTGGTTGGTTTGGTTGCCATGCTTTTGGCTTGCAAGTATGAGGAAGTTTCTGTGCCGGTGGTTGGCGATTTAATCCTTATTTCGGATAAAGCTTACACAAGGAAGGATGTTCTGGACATGGAGAAGTTGATGCTCAACACATTGCAGTTTAACATTTCTGTGCCAACTGCATATGTTTTTATGAGAAGATTCCTGAAGGCAGCTCAAGCCGACAAAAAACTTGAGCTGCTGGCTTTCTTCTTGATAGAGCTCTCTCTTGTGGAATATGATATGCTGAAGTTCCCGGCATCTTTGCTAGCTGCGGCCGCAGTCTACACGGCTCAATGCACTGTCAGTGGCTTCAAACAATGGAACAAGACATGTGAATGGCACACAAACTACTCAGAAGATCAGATATTCGAGTGCTCTCGGATGATGGTTGGCTTACACCAGAAGGCCGCGACTGCGAAACTCACTGGTGTGCGTAGGAAGTACAGTTCATCTAACTATAGCTATACTGCAAAATGCGAACCGGCATGTTTTCTTCTGGAGAACCAATTCTAG 1284 0.4299 MGGSDENNSNSTLPRILQGMNNQNQNVGTRKFGQNRRALSVINQNLVQGRSYPCVVNKRPLPGKQEMCEKKQADPVHRPITRRFAAQIASQQQQSCAEDPTKSNPSNSTRFEDLILIDEEQKLTADQPVPMSLEKPKLVQEEIEMEDIVEEESIINIDSSDVDDHLAVVEYIEDLHAHYRKFESLNCVSPDYMAQQFDINERMRAILVDWLIEVHDKFNLMQETLFLTINLIDRFLAKQTVIRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKDVLDMEKLMLNTLQFNISVPTAYVFMRRFLKAAQADKKLELLAFFLIELSLVEYDMLKFPASLLAAAAVYTAQCTVSGFKQWNKTCEWHTNYSEDQIFECSRMMVGLHQKAATAKLTGVRRKYSSSNYSYTAKCEPACFLLENQF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01139 427 SUPERFAMILY Cyclin-like 301 418 IPR036915 -
Arst1g01139 427 FunFam G2/mitotic-specific cyclin-1 288 414 - -
Arst1g01139 427 CDD CYCLIN_AtCycB-like_rpt2 302 418 - -
Arst1g01139 427 Gene3D - 174 414 - -
Arst1g01139 427 SMART Cyclin_C_2 302 419 IPR004367 -
Arst1g01139 427 ProSitePatterns Cyclins signature. 204 235 IPR006671 -
Arst1g01139 427 Gene3D - 188 300 - -
Arst1g01139 427 MobiDBLite consensus disorder prediction 88 108 - -
Arst1g01139 427 SMART cyclin_7 306 388 IPR013763 -
Arst1g01139 427 SMART cyclin_7 209 293 IPR013763 -
Arst1g01139 427 SUPERFAMILY Cyclin-like 163 299 IPR036915 -
Arst1g01139 427 CDD CYCLIN_AtCycB-like_rpt1 151 297 - -
Arst1g01139 427 PANTHER CYCLINS 122 407 IPR039361 -
Arst1g01139 427 PIRSF Cyclin_A_B_D_E 3 427 IPR046965 GO:0016538|GO:0044772
Arst1g01139 427 Pfam Cyclin, C-terminal domain 302 417 IPR004367 -
Arst1g01139 427 Pfam Cyclin, N-terminal domain 178 300 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01139 Arst-Chr1 11235077 11238570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01139 1 423 Core Cell Cycle Gene Families AT1G20610 55.556 4.38e-168 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01139 K21777 - gmx:100779889 570.466