Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01100 ATGAAGGTTGGTATCAACTTCACAATTATTCGGAGGAAGTTCCTTAGATTATCCAACAAAGACAACATCATCACTACTCTACCTTACACAAGAAGAAACCAACTCGAAGAAGATGATAATGAAGCCACCATAGGAAGCAATAATGAAGAAGAAACCACCACCATAGCTAAGGAAGATCTTGCGGCAATCAAGATCCAAGCTTATTTTAGGGGTCATCTTGCTAGAAGAGCATATGGAGCTCTTAGAAGCATTGTGAAGGTGCAAGCATTGGTGCGTGGTGTTTTTGTGAGGAAACAATCACATATTGCTATGCAATGTATGCATGCAATTCTTCGTTTACAACTTAGGGTTCGAGCAAGGCAGCTCCACCTCCATGGAACCTTTCATAATTATTAA 396 0.4015 MKVGINFTIIRRKFLRLSNKDNIITTLPYTRRNQLEEDDNEATIGSNNEEETTTIAKEDLAAIKIQAYFRGHLARRAYGALRSIVKVQALVRGVFVRKQSHIAMQCMHAILRLQLRVRARQLHLHGTFHNY 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01100 131 Gene3D - 56 109 - -
Arst1g01100 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 101 IPR027417 -
Arst1g01100 131 ProSiteProfiles IQ motif profile. 58 86 IPR000048 GO:0005515
Arst1g01100 131 ProSiteProfiles IQ motif profile. 82 109 IPR000048 GO:0005515
Arst1g01100 131 PANTHER IQ-DOMAIN 5-RELATED 42 123 - -
Arst1g01100 131 SMART iq_5 57 79 IPR000048 GO:0005515
Arst1g01100 131 SMART iq_5 80 101 IPR000048 GO:0005515
Arst1g01100 131 Pfam IQ calmodulin-binding motif 82 99 IPR000048 GO:0005515
Arst1g01100 131 Pfam IQ calmodulin-binding motif 61 78 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01100 Arst-Chr1 11002992 11003964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01100 30 125 IQD Protein Family AT3G51380 56.250 2.91e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01100 - - ccaj:109793784 121.324