Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01094 ATGGAGTTTGTGACAGAAAATTCAAGTCCTTTGTTGGGTTCCTTTGTGGAGAGGGTGAACATGGTTGGTAGCCATGCCCTCTCTGCCATTGTTAGGAACATCTTCTCTGCCATCTTCACCTTCTGCTTTGCATTTGTGGGGACTTTGTTGGGGGCTATGACTGGAGCTTTGATAGGACAAGAGACAGAGAGTGGATTCATTAGAGGAGCTGCCATTGGAGCCATTTCAGGAGCTGTTTTTTCCATTGAAGTTTTTGAATCTTCTCTTGTTCTTTGGCAATCTGATGAATCTGGAATTGGCTGCTTCTTATACTTGCTTGATGTAATTGCAAGCCTATTAAGTGGAAGACTTGTGAGAGAAAGGATTGGTCCAGCAATGTTAAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAGATTAACTTTGATGATGTTCAAAACATCTTTGACACTGGTGGTGCAAAAGGCTTATCAAAAGATTCAGTTGAAAAGATCTCAAAGATCATAATTACAAGTGACAACAATGTTGATGCTTCTGGTGAAAAGGTTTCTTGCTCAGTTTGCCTTCAGGACTTTCAAATTGGAGAAACAGTTAGAAGCTTGCCCCATTGCCATCACATGTTTCACCAACCTTGCATTGACAAGTGGCTCATAAGGCATGGATCTTGCCCTCTATGTAGAAGGGATCTGTAA 690 0.4203 MEFVTENSSPLLGSFVERVNMVGSHALSAIVRNIFSAIFTFCFAFVGTLLGAMTGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLVLWQSDESGIGCFLYLLDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEINFDDVQNIFDTGGAKGLSKDSVEKISKIIITSDNNVDASGEKVSCSVCLQDFQIGETVRSLPHCHHMFHQPCIDKWLIRHGSCPLCRRDL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01094 229 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 14 228 IPR044523 -
Arst1g01094 229 ProSiteProfiles Zinc finger RING-type profile. 184 226 IPR001841 -
Arst1g01094 229 SUPERFAMILY RING/U-box 172 229 - -
Arst1g01094 229 SMART ring_2 184 225 IPR001841 -
Arst1g01094 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 229 IPR013083 -
Arst1g01094 229 FunFam NEP1-interacting protein-like 1 144 229 - -
Arst1g01094 229 Pfam Ring finger domain 183 226 IPR001841 -
Arst1g01094 229 CDD RING-H2_NIPL1-like 183 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01094 Arst-Chr1 10947509 10950907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01094 9 229 C3H Transcription Factor Family AT5G66070 74.661 2.90e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01094 - - qsa:O6P43_033568 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00491 5 4095394 4097655 Arst1g01094 1 10947509 10950907 PCT