Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01093 ATGCGCATCGCAGTTCCAACGACGACGACGACTTCCATGGCCGGCGACGAGAGACAAACTTCTTACCGTGTTCTGGCGGATCGGTGTCGGACACTGGAGGAGGAACAAGCCAAGCTCAGGGAACAGTTCCGCCAACTCTTGCAGGAGAAGGAAGAGGAAGAAGAAGAAGTGGTGGTTGCAGATTCAACGCTGCGTTTTCTTTCGGGGAACTTCTTCTCGGATAGTCCGTACGCTAGCGTGTTGAAATGCATGGGACACGCCGTTCATGTCTACAGAGCTTCCTCCGGTGAGATCATATATTGGAATCGTTCAGCAGAAACACTGTATGGATGGAAAGACTATGAAATCATTGGTCAAAGAGTTGCTAAGTTCCTTGTTACCGAAGAGTGTTATGAATCTCTGCAGAATATTCTAGAAAGGTTGATCAGAGGAGTTCCATGGTCTGGAAAGTTTCCTTTCAAGAAGAGATCTGGTGAAGTATTCATAGCAATAGTGACTAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTATTATCACTGTTTCTAGTGATGCCGCTGTATTTAACTCAATGGATTCAGAAAATAGAAGTTACCAACCTGGTAACAATGGCAAAGCTGGAGGACAGAGGATAAATTTCAAAAGAATTCAGTGGCCTCCACGACCGTTGATTGCATCATCTGTCTCTAATCTGGCATCAAAGATTCTCCTAAATCGGCATCCGGATGATGCATTTTCCAGGAATACTACAACAGATGGAGATGAAGAAAAACACAGCATTCATGAAAAAGAACGTCATTCTAGTCATCAGAGAAGTGAAAACAGAACTTTTAGGGAGGTGTCCGAGAAGGTTAAGTCTACTATTGCAGCCAGAGTCCTAGCCAAGCTACAAACAGGGGGAAGTGAAAAATGTGGGAAGGATGATGGAAGCATTAAAAGTAATTGCACGAATGATTGTTCCGGAAGTAAGAGAGTGAATAATGAGGGTGATTCTTCTGGAGGCTCAGTAGCTTTAACTCCACGCAAGGATGGTGCTAATGAAGAGGATAGAGAAGACCCATTGTTAAGATTACACTGCAAATTTAATCCAAAGAAAAAGGAACAAGAAGCTATAAATATGGTGATAGAAGATGAAATGAAAAAGCAACAAGAAGGACTGCAATTGCAAAGTACACGAGAAAGCACTGGCAGTAATGGAGGCAGTAATGGAAGTTCATCAAGTAAGGGTGACAATGAGTCAAACTCTATTGTGAAGTCTGAAATCCATTGGGAAAACCTTCAATTAAGAGAGGAGATTGGTCAAGGGTCTTATGCAGTTGTGTATCACGGAATATGGAATGGATCGGATGTTGCTGTCAAGGTTTACTTTGGGAATGGATACACAGAGGAGACCTTACATGACTACAAAAAAGAGATTGATATAATGAAGAGACTAAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCGCAGGAAAGGCTTGCCATTGTAACAGAACTATTACCTAGGGGAAGCCTTTTCAAAATTCTGCACAAGAGTAATCAGCCACTAGATATCAGAAGGCTTTTAAGGATGGCTCTTGATGTTGCTAAAGGTATGAATTATCTTCATCATAGAAATCCACCCATTGTGCATAGAGACCTAAAGTCTTCTAATCTGCTTGTTGATAAAAACTGGACTGTCAAGGTTGGAGACTTTGGTTTGTCAAGGTTGAAGGATTCAACTTTATTGACTTCAAAAGGAAGAGGCACTCCTCAATGGATGGCCCCTGAAGTCCTACGAAATGAGCCTTCCAATGAAAAGTCGGATGTGTACAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCAGTCCATTCCATGGGAAAATTTGAATTCCTTACAGGTGGTTGGAGTAGTAGGATTTATGGATAGAAGACTTGAGCTTCCGGAAGGGCTTGATCCCCAAGTGGCATCAGTCATTCGTGACTGCTGGCAAAGTGACCCAGAACAACGCCCATCGTTTCAAGAGCTAATACAGAGAATGATGTTCCTTGTTAACAAAGTAAACGCAGTGTCAATTAGGAGAAATTCAGAATCATAA 2091 0.4218 MRIAVPTTTTTSMAGDERQTSYRVLADRCRTLEEEQAKLREQFRQLLQEKEEEEEEVVVADSTLRFLSGNFFSDSPYASVLKCMGHAVHVYRASSGEIIYWNRSAETLYGWKDYEIIGQRVAKFLVTEECYESLQNILERLIRGVPWSGKFPFKKRSGEVFIAIVTKTPLYEDGELVGIITVSSDAAVFNSMDSENRSYQPGNNGKAGGQRINFKRIQWPPRPLIASSVSNLASKILLNRHPDDAFSRNTTTDGDEEKHSIHEKERHSSHQRSENRTFREVSEKVKSTIAARVLAKLQTGGSEKCGKDDGSIKSNCTNDCSGSKRVNNEGDSSGGSVALTPRKDGANEEDREDPLLRLHCKFNPKKKEQEAINMVIEDEMKKQQEGLQLQSTRESTGSNGGSNGSSSSKGDNESNSIVKSEIHWENLQLREEIGQGSYAVVYHGIWNGSDVAVKVYFGNGYTEETLHDYKKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTELLPRGSLFKILHKSNQPLDIRRLLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDSTLLTSKGRGTPQWMAPEVLRNEPSNEKSDVYSFGVILWELMTQSIPWENLNSLQVVGVVGFMDRRLELPEGLDPQVASVIRDCWQSDPEQRPSFQELIQRMMFLVNKVNAVSIRRNSES 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01093 696 NCBIfam PAS domain S-box protein 94 185 IPR000014 -
Arst1g01093 696 Gene3D PAS domain 90 188 - -
Arst1g01093 696 ProSiteProfiles PAS repeat profile. 95 145 IPR000014 -
Arst1g01093 696 ProSiteProfiles Protein kinase domain profile. 427 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01093 696 CDD PAS 96 185 IPR000014 -
Arst1g01093 696 MobiDBLite consensus disorder prediction 385 415 - -
Arst1g01093 696 Gene3D Phosphorylase Kinase; domain 1 420 504 - -
Arst1g01093 696 ProSitePatterns Protein kinases ATP-binding region signature. 433 454 IPR017441 GO:0005524
Arst1g01093 696 FunFam PAS domain-containing protein tyrosine kinase family protein 505 694 - -
Arst1g01093 696 PRINTS Tyrosine kinase catalytic domain signature 501 514 IPR001245 GO:0004672|GO:0006468
Arst1g01093 696 PRINTS Tyrosine kinase catalytic domain signature 586 596 IPR001245 GO:0004672|GO:0006468
Arst1g01093 696 PRINTS Tyrosine kinase catalytic domain signature 605 627 IPR001245 GO:0004672|GO:0006468
Arst1g01093 696 PRINTS Tyrosine kinase catalytic domain signature 649 671 IPR001245 GO:0004672|GO:0006468
Arst1g01093 696 PRINTS Tyrosine kinase catalytic domain signature 540 558 IPR001245 GO:0004672|GO:0006468
Arst1g01093 696 SMART serkin_6 427 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01093 696 MobiDBLite consensus disorder prediction 382 415 - -
Arst1g01093 696 MobiDBLite consensus disorder prediction 299 357 - -
Arst1g01093 696 MobiDBLite consensus disorder prediction 246 285 - -
Arst1g01093 696 FunFam Serine/threonine-protein kinase isoform 1 418 505 - -
Arst1g01093 696 SUPERFAMILY Protein kinase-like (PK-like) 416 684 IPR011009 -
Arst1g01093 696 MobiDBLite consensus disorder prediction 343 357 - -
Arst1g01093 696 SUPERFAMILY PYP-like sensor domain (PAS domain) 87 185 IPR035965 -
Arst1g01093 696 Pfam Protein tyrosine and serine/threonine kinase 427 677 IPR001245 GO:0004672|GO:0006468
Arst1g01093 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Arst1g01093 696 MobiDBLite consensus disorder prediction 243 285 - -
Arst1g01093 696 Coils Coil 22 63 - -
Arst1g01093 696 Gene3D Transferase(Phosphotransferase) domain 1 505 695 - -
Arst1g01093 696 Pfam PAS domain 94 185 IPR000014 -
Arst1g01093 696 CDD STKc_MAP3K-like 433 678 - -
Arst1g01093 696 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 243 678 - -
Arst1g01093 696 MobiDBLite consensus disorder prediction 311 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01093 Arst-Chr1 10937735 10942695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01093 13 684 MAP Kinase Kinase Kinase AT4G23050 45.964 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Arst1g01093 PK_Tyr_Ser-Thr 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01093 - - gmx:100813707 940.258