Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01090 ATGGTTGATGGATATAGAAGTATGGTGGAGAACCCATCACCAATGAGAAACGCAACAAATCACATGATGCTGGGATTTCTTGCTGGAATTTCGACAGTTATGTTAGTTGCTGCCATATTGTTCTGCCTCTTTGGAACAAAGCTCATTGCACTTTTCAAACAACATAGGACTTTGAAAGGTAAAGAGTACAACAGCTTCAAAGATGAAACAATGCCTCTAAGGCGTTTTACCTTTGATGAAATAGAGAGAGCTACCAAGAACTTTAGCCAAGAATTCTTACTTGGTTCTGGTGCATTTGGAAATGTTTACAAAGGAAATTTTGAATTAGAAGGAACTTTAGCCATTAAGAGAGCTCACGGCGAATCCTTCTTAAGCGTCGATGAATTCCGAAATGTTAGGCTCCTTGCAACTGTAAAGCACAGAAATCTTATTGGTCTAGTGGGGTATTGTGAAGAACCAGAAAGATTTGGGGCAAGAATTCTGGTATATGAATGTGTACCAAATGGCTCTCTGCTTGAATATATGATTGGAAACAAGAATAGCTTGACTTGGAAGCAAAGAGTGAACATAGCAATAGGAGCAGCTAGAGGCATAGCTTATTTACATGAAGGAATAAAGCCGAGTATAATTCATCGTGATCTCAAACCAAGTAACATCCTATTAGGTGAAGGTTTCGAGGCTAAGGTCTCGGATTTCGGGTTGGTGAAATCCGGCCCTATTGAGGACCAATCACATGTGAGTAGCCAAATCAAAGGGACACCAGGGTATCTTGATCCGGCATACTGTTCAAGCTTTCACTTGACAAAATTCACTGATGTTTATAGCTTTGGTGTCATACTTCTTCAACTTGTTTCAGCTAGACCTGCTGTTGATACAAATGAGGTACAAAGCAAGCAACATATAATTGATTGGGCAAGCCCTAGCTTAGAGAAGGGTAATGTTGAAGAAATCATAGATGCAAACTTGCTATGTCAAAGTGAGCCATGCAATATGAGAGTTATGCTGAAGATGGGTCAACTTGCTTTAAGATGTGTGGTTCAAGAACCAAAAAGTAGACCTACAATGATTCAAGTGTGTCAAGAACTAGAACAAGCACTATACTCTGAAGATACCTTCAACAACAAGCAACATTCTTCAAAGGGTTTCCCATCAATTGGATTGTCTCAGCAATCATCAGTGGAAAAGAATGATAGCTTTGTGAGCATAGATGGTGTTGGACTTCAGAAATTCCATATTGATATGGATAGCTTATCATTTCAGAGTACAAGGTTAATGTGCCTAGAAAATAATAGTATAAGTATTGACATTGATAACAACAACTTGAAGAGAATTCAAGAGGATGGGGACATATAA 1353 0.388 MVDGYRSMVENPSPMRNATNHMMLGFLAGISTVMLVAAILFCLFGTKLIALFKQHRTLKGKEYNSFKDETMPLRRFTFDEIERATKNFSQEFLLGSGAFGNVYKGNFELEGTLAIKRAHGESFLSVDEFRNVRLLATVKHRNLIGLVGYCEEPERFGARILVYECVPNGSLLEYMIGNKNSLTWKQRVNIAIGAARGIAYLHEGIKPSIIHRDLKPSNILLGEGFEAKVSDFGLVKSGPIEDQSHVSSQIKGTPGYLDPAYCSSFHLTKFTDVYSFGVILLQLVSARPAVDTNEVQSKQHIIDWASPSLEKGNVEEIIDANLLCQSEPCNMRVMLKMGQLALRCVVQEPKSRPTMIQVCQELEQALYSEDTFNNKQHSSKGFPSIGLSQQSSVEKNDSFVSIDGVGLQKFHIDMDSLSFQSTRLMCLENNSISIDIDNNNLKRIQEDGDI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01090 450 PANTHER OS01G0750732 PROTEIN 69 379 - -
Arst1g01090 450 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 166 369 - -
Arst1g01090 450 FunFam Putative LRR receptor-like serine/threonine-protein kinase 58 165 - -
Arst1g01090 450 Gene3D Phosphorylase Kinase; domain 1 49 164 - -
Arst1g01090 450 ProSiteProfiles Protein kinase domain profile. 88 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01090 450 SUPERFAMILY Protein kinase-like (PK-like) 65 363 IPR011009 -
Arst1g01090 450 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Arst1g01090 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Arst1g01090 450 Pfam Protein kinase domain 91 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g01090 450 Gene3D Transferase(Phosphotransferase) domain 1 166 384 - -
Arst1g01090 450 SMART serkin_6 88 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01090 Arst-Chr1 10932273 10935975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01090 64 400 Receptor kinase-like Gene Family AT1G30570 41.765 9.97e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Arst1g01090 Pkinase 6.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01090 - - var:108328541 619.387